| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162145958
Identifier: 162145958
GI number: 162145958
Start: 131614
End: 133338
Strand: Reverse
Name: 162145958
Synonym: GDI_0124
Alternate gene names: NA
Gene position: 133338-131614 (Counterclockwise)
Preceding gene: 162145959
Following gene: 162145957
Centisome position: 3.38
GC content: 64.64
Gene sequence:
>1725_bases ATGATCTGGTGGCTCGAAAATCCGACTCGCGCACGAACCGAGCGTCAGGGCGTGGCTAACCTCGCGGAGCGCGTCGCCTG GCTCAAGGGCGTGCGCTGGCATCTCTCGAACGGCGCTGCGCTCGCGGTCGATTTCGAGATCGAGCATGACGGCGACAGCG TTCCGTTGACGATGACCTATGCCGAATTCCACCCCAATTCCCCACCCATCGTGCTTCCCAGAGACGGGAGTCGCCTGTCG AACCACCAATATGGGGCGGGCGGAAATCTCTGCCTGGAATATCGCGCCGACAACTGGGAGACGTCGATCACCGGGGCGAT GATGATCGAGAGCGCGCATCGTCTGATCGCCGGTGAACGCGATGTCGAGGGTCCCGAACTGCCCTCGGCGCATGCCGTTT CGCTCGGCCAAAGCGTGCGCGGCTCCTATTTCCGGTTCCTGCTGACGCGGCAAATGGAAGAGCGCCTGAAGGCGATCGCA CCCGGTCAGTCGTTCGAGATTGGTATTGCGGAGAAATATTACGCCGATACCTTCACGGTGACGATCATAGAGACCGACGG CGTCACCGATGGCCGAGCATGGCCGGCCGGGATTCGGGAGACGACGAAGCGCGGCCAGGCCATTCGGCTGCCCGAAGGGA CAGCGATGCCCGCAGCCACGCAAGCCGGTATCGCCGACCTGCTCGGCGCGCTTGGCCTCGGAGCGCTTCGCGAGGCTGCA CTCGCCGCCAGCGGAGAAATGGACTTGGTGCTGGCGTCCGCGACCGAGACCGCACATTTCTATGCCTATGACGCCGGCCA GAAGCGCGTCTTCGGTCGCTCGCGACTACTGAAGGTCGCCACCAGTGACCGGCTCCCGGACGACTACTCTCTCCTCGCCG GAAAAAGCGTCGGCATCGTCGGATGCGGCTCGCTTGGCTCCAAGCTCGCCGCGATGCTGGCGCGCGCCGGCGTGCGGATG TTCACGCTGGTCGACGATGACGTCTTTTTCGCCGAGAATCTGGTGCGCAACGAACTTGGCGCCGCCGCGGCCGGCGTCCA TAAGGCCGACGCGGTCCGCAGCCGCCTCATTGAGATTGCCGGCACGATCGACGTCACGGTGCGGCGTGTCGCGCTGGGCG GTCAGGAAAGCGCCGATTCCACGGACTCGGTGATGTCGGCGTTGCGCGCCTGCGACCTCATCATCGACGCCACCGCCGAC GCGCATTGCTTCAACTTCTGCGCCGCGGTCGCGAAGGAAAGCCTGAAGCCACTCGTCTGGGGCGAGGTGTTCGCCGGGGG CATCGGCGGCCTCGTGGCACGTGTTCGATCAGGCCATGAGCCGGAGCCTCAGGCCGCCCGCAACCAGATCAACGCTTGGT GCAATGCACATGGCGTCCCCGCCCCGCTTGCCGGCCTAGCTGCCCCCTATGAAGCGGCAACCGGAAGCGCCAGACCGCTT GTCGCTGACGACGCCGAAGTTTCCATCATCGCAGGTCACCTCGCGCGTCTGGCAACCGATGTGCTCACCCTGCCGGAGGA CAGTGCGTTTACGGCCCCCGCCTATGCGATAGGCTTGCGCAAGGCCTGGATTTTCTCTCAGCCGTTTGAGACATGGCCTA TCGAACTCGCTGGCTCGGCCCCCTGGAAAGCCGAACAGGACCCCGCTTCTGTCGCAGACAGCCTTGCGCTCTTGCGCGAA CTCTTGCCCTCGGCGTTCGATGGTCACGATCAGCCTTCCGAATGA
Upstream 100 bases:
>100_bases CGCTGCTCAAAACCGCTTCGGTGGCGCCCGTAGCCGAAGGTCTTTCCTTTCCGGACAGGAGCCGGGTGCCAACCAAGCCG CAGGGGTTCGGCGGCGCGGA
Downstream 100 bases:
>100_bases TCAGCGGGCGCAGCTTCGCAATTGTCTGCGAGGGGCCGGTCGGCGTGAGATCGGCGGCATCCTCATGGGAGAGCAAGTCG CACCCGATCATTTCCGCATC
Product: ubiquitin-activating enzyme
Products: NA
Alternate protein names: MoeB-Like Protein; ThiF Family Protein
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MIWWLENPTRARTERQGVANLAERVAWLKGVRWHLSNGAALAVDFEIEHDGDSVPLTMTYAEFHPNSPPIVLPRDGSRLS NHQYGAGGNLCLEYRADNWETSITGAMMIESAHRLIAGERDVEGPELPSAHAVSLGQSVRGSYFRFLLTRQMEERLKAIA PGQSFEIGIAEKYYADTFTVTIIETDGVTDGRAWPAGIRETTKRGQAIRLPEGTAMPAATQAGIADLLGALGLGALREAA LAASGEMDLVLASATETAHFYAYDAGQKRVFGRSRLLKVATSDRLPDDYSLLAGKSVGIVGCGSLGSKLAAMLARAGVRM FTLVDDDVFFAENLVRNELGAAAAGVHKADAVRSRLIEIAGTIDVTVRRVALGGQESADSTDSVMSALRACDLIIDATAD AHCFNFCAAVAKESLKPLVWGEVFAGGIGGLVARVRSGHEPEPQAARNQINAWCNAHGVPAPLAGLAAPYEAATGSARPL VADDAEVSIIAGHLARLATDVLTLPEDSAFTAPAYAIGLRKAWIFSQPFETWPIELAGSAPWKAEQDPASVADSLALLRE LLPSAFDGHDQPSE
Sequences:
>Translated_574_residues MIWWLENPTRARTERQGVANLAERVAWLKGVRWHLSNGAALAVDFEIEHDGDSVPLTMTYAEFHPNSPPIVLPRDGSRLS NHQYGAGGNLCLEYRADNWETSITGAMMIESAHRLIAGERDVEGPELPSAHAVSLGQSVRGSYFRFLLTRQMEERLKAIA PGQSFEIGIAEKYYADTFTVTIIETDGVTDGRAWPAGIRETTKRGQAIRLPEGTAMPAATQAGIADLLGALGLGALREAA LAASGEMDLVLASATETAHFYAYDAGQKRVFGRSRLLKVATSDRLPDDYSLLAGKSVGIVGCGSLGSKLAAMLARAGVRM FTLVDDDVFFAENLVRNELGAAAAGVHKADAVRSRLIEIAGTIDVTVRRVALGGQESADSTDSVMSALRACDLIIDATAD AHCFNFCAAVAKESLKPLVWGEVFAGGIGGLVARVRSGHEPEPQAARNQINAWCNAHGVPAPLAGLAAPYEAATGSARPL VADDAEVSIIAGHLARLATDVLTLPEDSAFTAPAYAIGLRKAWIFSQPFETWPIELAGSAPWKAEQDPASVADSLALLRE LLPSAFDGHDQPSE >Mature_574_residues MIWWLENPTRARTERQGVANLAERVAWLKGVRWHLSNGAALAVDFEIEHDGDSVPLTMTYAEFHPNSPPIVLPRDGSRLS NHQYGAGGNLCLEYRADNWETSITGAMMIESAHRLIAGERDVEGPELPSAHAVSLGQSVRGSYFRFLLTRQMEERLKAIA PGQSFEIGIAEKYYADTFTVTIIETDGVTDGRAWPAGIRETTKRGQAIRLPEGTAMPAATQAGIADLLGALGLGALREAA LAASGEMDLVLASATETAHFYAYDAGQKRVFGRSRLLKVATSDRLPDDYSLLAGKSVGIVGCGSLGSKLAAMLARAGVRM FTLVDDDVFFAENLVRNELGAAAAGVHKADAVRSRLIEIAGTIDVTVRRVALGGQESADSTDSVMSALRACDLIIDATAD AHCFNFCAAVAKESLKPLVWGEVFAGGIGGLVARVRSGHEPEPQAARNQINAWCNAHGVPAPLAGLAAPYEAATGSARPL VADDAEVSIIAGHLARLATDVLTLPEDSAFTAPAYAIGLRKAWIFSQPFETWPIELAGSAPWKAEQDPASVADSLALLRE LLPSAFDGHDQPSE
Specific function: Unknown
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61117; Mature: 61117
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWWLENPTRARTERQGVANLAERVAWLKGVRWHLSNGAALAVDFEIEHDGDSVPLTMTY CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEEEEEECCCCCCEEEEEE AEFHPNSPPIVLPRDGSRLSNHQYGAGGNLCLEYRADNWETSITGAMMIESAHRLIAGER EEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC DVEGPELPSAHAVSLGQSVRGSYFRFLLTRQMEERLKAIAPGQSFEIGIAEKYYADTFTV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHEECCEEEE TIIETDGVTDGRAWPAGIRETTKRGQAIRLPEGTAMPAATQAGIADLLGALGLGALREAA EEEEECCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHH LAASGEMDLVLASATETAHFYAYDAGQKRVFGRSRLLKVATSDRLPDDYSLLAGKSVGIV HHCCCCCEEEEEECCCCEEEEEEECCCHHHHCHHHEEEEHHCCCCCCCHHHHCCCCCCEE GCGSLGSKLAAMLARAGVRMFTLVDDDVFFAENLVRNELGAAAAGVHKADAVRSRLIEIA ECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GTIDVTVRRVALGGQESADSTDSVMSALRACDLIIDATADAHCFNFCAAVAKESLKPLVW CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHH GEVFAGGIGGLVARVRSGHEPEPQAARNQINAWCNAHGVPAPLAGLAAPYEAATGSARPL HHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCCCCE VADDAEVSIIAGHLARLATDVLTLPEDSAFTAPAYAIGLRKAWIFSQPFETWPIELAGSA EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCC PWKAEQDPASVADSLALLRELLPSAFDGHDQPSE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIWWLENPTRARTERQGVANLAERVAWLKGVRWHLSNGAALAVDFEIEHDGDSVPLTMTY CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEEEEEECCCCCCEEEEEE AEFHPNSPPIVLPRDGSRLSNHQYGAGGNLCLEYRADNWETSITGAMMIESAHRLIAGER EEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC DVEGPELPSAHAVSLGQSVRGSYFRFLLTRQMEERLKAIAPGQSFEIGIAEKYYADTFTV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHEECCEEEE TIIETDGVTDGRAWPAGIRETTKRGQAIRLPEGTAMPAATQAGIADLLGALGLGALREAA EEEEECCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHHHHH LAASGEMDLVLASATETAHFYAYDAGQKRVFGRSRLLKVATSDRLPDDYSLLAGKSVGIV HHCCCCCEEEEEECCCCEEEEEEECCCHHHHCHHHEEEEHHCCCCCCCHHHHCCCCCCEE GCGSLGSKLAAMLARAGVRMFTLVDDDVFFAENLVRNELGAAAAGVHKADAVRSRLIEIA ECCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH GTIDVTVRRVALGGQESADSTDSVMSALRACDLIIDATADAHCFNFCAAVAKESLKPLVW CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHH GEVFAGGIGGLVARVRSGHEPEPQAARNQINAWCNAHGVPAPLAGLAAPYEAATGSARPL HHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHCCCCCCCE VADDAEVSIIAGHLARLATDVLTLPEDSAFTAPAYAIGLRKAWIFSQPFETWPIELAGSA EECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCC PWKAEQDPASVADSLALLRELLPSAFDGHDQPSE CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA