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The map label for this gene is 162145900

Identifier: 162145900

GI number: 162145900

Start: 68012

End: 69835

Strand: Reverse

Name: 162145900

Synonym: GDI_0062

Alternate gene names: NA

Gene position: 69835-68012 (Counterclockwise)

Preceding gene: 162145901

Following gene: 162145899

Centisome position: 1.77

GC content: 65.08

Gene sequence:

>1824_bases
ATGACGATCCAGAAGCGTCCGGGCCCACTGGAAGCACTGGTCGATTTCTACGCCCGCATGGACGATGCCGAGGACCCTGG
CTGGGGGCGGGAGAAATTCGGCTGGTGCGTCGTGATCGACGCGGAAGGCCAGCCGATCGATGTGCTGGACCAACACGACC
ATGACGGCAGGAAGCCCCGTCCCCGGCTGTTCCTTGTCCCGGCTGCCGTCAAGCGCGCGTCCGGCATCGCGCCGAATTTC
CTGTGGGACAAGACATCCTACGTGCTGGGCCGCACCGCCGGCGCCGGCAAGCGCACCGCGCAGGAGCATGAAGCCTTCGT
CGCGTTCAACCTGAAACGGATGGCGGAAACATCCGACGTGGGCCTGGTCGCATTCCGGCGGTTCCTGGAACGCTGGACGC
CCGCGCAGTTCGACACGCCCCTCTTCCCGGCGGAGATGCTGGACGCGAACATCATGTTCCGCCTGGAGGGCGACAGGGAC
TACCTTCATCGCCGCCCGGCGGCGCAGCGACTGGTCGAGGCGGCGCTCGATAACGGGCATGAACGGCAATCATTCTGTCT
GGTGACGGGGCAGCGGGCGGCGCCGGCCCGGCTACATCCGACGATCAAAGGCGTGGAAGGCGCGCAGACGTCCGGGGCCA
GCCTGGTATCGTTCAATCTCGATGCATTCTGTTCCTATGACCGGAAGCAAGGCGACAACGCTCCGACATCGCAGGCGGCC
GCCTTTCGTTATGGGGCCGCGCTGAACCGGTTGCTGACACGCGACGGGCCCAACCGGCTCCGGCGGCCGATCGGGGACGC
GACCGTGATATTCTGGGCGGATGGCAGCGATGCGCAGGTCGCGAAAAAGGCCGATGCGTGGATTCAGGAGGCGATTGCGC
CGAACCTGCTGGACGCGGATGCCGCGCGCCGGATCGGCGAGGAACTGACCGCGCTGGCCCAAGGCCGCCCCCTGTCGCAA
TTACGGCCGGACATCCCACCCGATACACGTTTTTACGTTATGGGCCTGTCGCCCAACGCAGCACGCCTGTCGGTGCGTTT
CTGGTTGTCGGATAGCCTGGATGTCTTCGCCCATCGCCTGGCGGAGCATTACGAGGACACCCGCATTGCGCCATCCCCGT
GGTCGCGTCCACCCACCGTCAACCTGCTGCTGGCGCGCACCGTGGCGGCACAGGACAAATACGACAACATTCCGCCACTA
CTGGCCGGGGAAATCATGCGTGCGATCCTGACCGGCACGCCCTATCCGCGAACGTGGCTGGCCGCGATCCTGATGCGGCT
GCGCGCGGGCGACGATCCGGCAACGGGCTGGCATGCCGCCGCCCTGCGTGCCGTGCTGCAGCGCCGGCGACGCCTGACGA
AAAATGCTTCGGACAATGGAGATGTTCCTGTGAGCCTCAATCGGGACTACCCCAGTATCGGGTATCAACTCGGCCGCCTC
TTCGCCGTTTACGAACTGGCGCAGCGGGCTGCGCTGGGCATAGGCGTGAAAGCGACAATGCGGGATAAATACTTCGCCGC
GGCCTCGGCCGCACCGGCCAGTATTTTTCCCGTCATCATCCGCAACAGCCAGAACCACCTGTCGAACGTCCGCAAGCGGA
CCCCCGGTTGGGCCGGCGTGATCGAACGCGAACTGGACGAGATTTTCGGACGCATCACGCCGTCCGGACCCCACGTGCTG
CCCCGCGCATTATCCCTGGAACATCAGGGAGAATTCGCCATCGGCTATTACCACCAGCGTCGGGAGAGGATTGGCGGCCG
GATGGCCGAGACCGCCTTGCAGGACGACGAGCAGGACATCGAGGACAATGCAACCCATGACTGA

Upstream 100 bases:

>100_bases
ACATCGATTTCGCGGACCAGCGCACGCCGCGCTTTTTCCGTGCCTGCATCGAGAGCGGCGTGATTGCGGTGCCGGCGGCC
GACAGTCCGGACCTGATCGC

Downstream 100 bases:

>100_bases
AGCGACCGCCATGCAGAATCGCCATGAATTCGTACTGTTCTTCGACGTTACCAACGGAAATCCGAATGGAGACCCGGATG
CCGGCAACATGCCGCGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Csd1 Family Protein; CRISPR-Associated Csd1 Family Protein; Csd1 Family CRISPR-Associated Protein; Crispr-Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Csd2 Family; Crispr-Associated Protein Csd1 Family

Number of amino acids: Translated: 607; Mature: 606

Protein sequence:

>607_residues
MTIQKRPGPLEALVDFYARMDDAEDPGWGREKFGWCVVIDAEGQPIDVLDQHDHDGRKPRPRLFLVPAAVKRASGIAPNF
LWDKTSYVLGRTAGAGKRTAQEHEAFVAFNLKRMAETSDVGLVAFRRFLERWTPAQFDTPLFPAEMLDANIMFRLEGDRD
YLHRRPAAQRLVEAALDNGHERQSFCLVTGQRAAPARLHPTIKGVEGAQTSGASLVSFNLDAFCSYDRKQGDNAPTSQAA
AFRYGAALNRLLTRDGPNRLRRPIGDATVIFWADGSDAQVAKKADAWIQEAIAPNLLDADAARRIGEELTALAQGRPLSQ
LRPDIPPDTRFYVMGLSPNAARLSVRFWLSDSLDVFAHRLAEHYEDTRIAPSPWSRPPTVNLLLARTVAAQDKYDNIPPL
LAGEIMRAILTGTPYPRTWLAAILMRLRAGDDPATGWHAAALRAVLQRRRRLTKNASDNGDVPVSLNRDYPSIGYQLGRL
FAVYELAQRAALGIGVKATMRDKYFAAASAAPASIFPVIIRNSQNHLSNVRKRTPGWAGVIERELDEIFGRITPSGPHVL
PRALSLEHQGEFAIGYYHQRRERIGGRMAETALQDDEQDIEDNATHD

Sequences:

>Translated_607_residues
MTIQKRPGPLEALVDFYARMDDAEDPGWGREKFGWCVVIDAEGQPIDVLDQHDHDGRKPRPRLFLVPAAVKRASGIAPNF
LWDKTSYVLGRTAGAGKRTAQEHEAFVAFNLKRMAETSDVGLVAFRRFLERWTPAQFDTPLFPAEMLDANIMFRLEGDRD
YLHRRPAAQRLVEAALDNGHERQSFCLVTGQRAAPARLHPTIKGVEGAQTSGASLVSFNLDAFCSYDRKQGDNAPTSQAA
AFRYGAALNRLLTRDGPNRLRRPIGDATVIFWADGSDAQVAKKADAWIQEAIAPNLLDADAARRIGEELTALAQGRPLSQ
LRPDIPPDTRFYVMGLSPNAARLSVRFWLSDSLDVFAHRLAEHYEDTRIAPSPWSRPPTVNLLLARTVAAQDKYDNIPPL
LAGEIMRAILTGTPYPRTWLAAILMRLRAGDDPATGWHAAALRAVLQRRRRLTKNASDNGDVPVSLNRDYPSIGYQLGRL
FAVYELAQRAALGIGVKATMRDKYFAAASAAPASIFPVIIRNSQNHLSNVRKRTPGWAGVIERELDEIFGRITPSGPHVL
PRALSLEHQGEFAIGYYHQRRERIGGRMAETALQDDEQDIEDNATHD
>Mature_606_residues
TIQKRPGPLEALVDFYARMDDAEDPGWGREKFGWCVVIDAEGQPIDVLDQHDHDGRKPRPRLFLVPAAVKRASGIAPNFL
WDKTSYVLGRTAGAGKRTAQEHEAFVAFNLKRMAETSDVGLVAFRRFLERWTPAQFDTPLFPAEMLDANIMFRLEGDRDY
LHRRPAAQRLVEAALDNGHERQSFCLVTGQRAAPARLHPTIKGVEGAQTSGASLVSFNLDAFCSYDRKQGDNAPTSQAAA
FRYGAALNRLLTRDGPNRLRRPIGDATVIFWADGSDAQVAKKADAWIQEAIAPNLLDADAARRIGEELTALAQGRPLSQL
RPDIPPDTRFYVMGLSPNAARLSVRFWLSDSLDVFAHRLAEHYEDTRIAPSPWSRPPTVNLLLARTVAAQDKYDNIPPLL
AGEIMRAILTGTPYPRTWLAAILMRLRAGDDPATGWHAAALRAVLQRRRRLTKNASDNGDVPVSLNRDYPSIGYQLGRLF
AVYELAQRAALGIGVKATMRDKYFAAASAAPASIFPVIIRNSQNHLSNVRKRTPGWAGVIERELDEIFGRITPSGPHVLP
RALSLEHQGEFAIGYYHQRRERIGGRMAETALQDDEQDIEDNATHD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67470; Mature: 67339

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQKRPGPLEALVDFYARMDDAEDPGWGREKFGWCVVIDAEGQPIDVLDQHDHDGRKPR
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PRLFLVPAAVKRASGIAPNFLWDKTSYVLGRTAGAGKRTAQEHEAFVAFNLKRMAETSDV
CEEEEEHHHHHHHCCCCCCCHHCCCHHHHCCCCCCCCCHHHHHHHHHEEEHHHHHCCCCH
GLVAFRRFLERWTPAQFDTPLFPAEMLDANIMFRLEGDRDYLHRRPAAQRLVEAALDNGH
HHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEEECCHHHHHCCHHHHHHHHHHHCCCC
ERQSFCLVTGQRAAPARLHPTIKGVEGAQTSGASLVSFNLDAFCSYDRKQGDNAPTSQAA
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCHHHCCCCCCCHHHH
AFRYGAALNRLLTRDGPNRLRRPIGDATVIFWADGSDAQVAKKADAWIQEAIAPNLLDAD
HHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHH
AARRIGEELTALAQGRPLSQLRPDIPPDTRFYVMGLSPNAARLSVRFWLSDSLDVFAHRL
HHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHH
AEHYEDTRIAPSPWSRPPTVNLLLARTVAAQDKYDNIPPLLAGEIMRAILTGTPYPRTWL
HHHHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH
AAILMRLRAGDDPATGWHAAALRAVLQRRRRLTKNASDNGDVPVSLNRDYPSIGYQLGRL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
FAVYELAQRAALGIGVKATMRDKYFAAASAAPASIFPVIIRNSQNHLSNVRKRTPGWAGV
HHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHH
IERELDEIFGRITPSGPHVLPRALSLEHQGEFAIGYYHQRRERIGGRMAETALQDDEQDI
HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHCCHHHHHHHCCCHHHH
EDNATHD
CCCCCCC
>Mature Secondary Structure 
TIQKRPGPLEALVDFYARMDDAEDPGWGREKFGWCVVIDAEGQPIDVLDQHDHDGRKPR
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PRLFLVPAAVKRASGIAPNFLWDKTSYVLGRTAGAGKRTAQEHEAFVAFNLKRMAETSDV
CEEEEEHHHHHHHCCCCCCCHHCCCHHHHCCCCCCCCCHHHHHHHHHEEEHHHHHCCCCH
GLVAFRRFLERWTPAQFDTPLFPAEMLDANIMFRLEGDRDYLHRRPAAQRLVEAALDNGH
HHHHHHHHHHHCCCCCCCCCCCCHHHHCCEEEEEEECCHHHHHCCHHHHHHHHHHHCCCC
ERQSFCLVTGQRAAPARLHPTIKGVEGAQTSGASLVSFNLDAFCSYDRKQGDNAPTSQAA
CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHCCHHHCCCCCCCHHHH
AFRYGAALNRLLTRDGPNRLRRPIGDATVIFWADGSDAQVAKKADAWIQEAIAPNLLDAD
HHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHH
AARRIGEELTALAQGRPLSQLRPDIPPDTRFYVMGLSPNAARLSVRFWLSDSLDVFAHRL
HHHHHHHHHHHHHCCCCHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEECCCHHHHHHHH
AEHYEDTRIAPSPWSRPPTVNLLLARTVAAQDKYDNIPPLLAGEIMRAILTGTPYPRTWL
HHHHHCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHH
AAILMRLRAGDDPATGWHAAALRAVLQRRRRLTKNASDNGDVPVSLNRDYPSIGYQLGRL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHH
FAVYELAQRAALGIGVKATMRDKYFAAASAAPASIFPVIIRNSQNHLSNVRKRTPGWAGV
HHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHH
IERELDEIFGRITPSGPHVLPRALSLEHQGEFAIGYYHQRRERIGGRMAETALQDDEQDI
HHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHCCHHHHHHHCCCHHHH
EDNATHD
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA