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The map label for this gene is yiaD [C]

Identifier: 162145880

GI number: 162145880

Start: 43636

End: 44778

Strand: Reverse

Name: yiaD [C]

Synonym: GDI_0041

Alternate gene names: 162145880

Gene position: 44778-43636 (Counterclockwise)

Preceding gene: 162145881

Following gene: 162145879

Centisome position: 1.14

GC content: 69.29

Gene sequence:

>1143_bases
ATGACAGTGCGGCACGGATTGCTTGCGGGGTCTTTCCTGGCGGCGACGCTCGCCTTCGGCTCTGTCCTGTCCGTTGCCCC
GGCCCATGCCCAGCCGGTGCAGGGCCTGTATGTCGCCGGCGAGGGTGGGGCCAGCTTCAACCAGGACCAGCGCGTCCGGT
CCTCGCCCAATTTCCCCGACGGACGCGACAGCTACCATACCGGCGCGACCGGCATCGGCAGCATCGGCTGGGGGCTGGGC
AACGGCTTCCGCGTGGAGGTCGAGGGCGACTACCGCAATAACGGGCTGAAGAATTTCGGGTCGGCCGGCGTTCCGTCCAG
CCATGTCGGCGGGCGGCAGCAGACCTATGGCGTCATGGCCAATGCGCTGTTCGACCTGGATATCGGCAAGAGCTGGCTGT
TCCCCTATTTCGGCGCCGGTGTCGGCTATGCCTGGCAGGCGATGAACGCCAGCGTGACCGCGCCCAATTTCAGCCAGCAG
ATCGGCGGTACCTTCGGCAACTTCGCCTATCAGGGCATTTTCGGCCTGGCTTTCCCGGTGCCGTGGGTCGTCGGGCTGTC
GGCGACGGCGGAATACCGGTTCTGGACCATGCTGGGCCCGCAATCGCATGGCGCGCGGTCGATCGGCACGGTCGGCGGGT
ACGACACCACCCGTGCCTACGGCCCCGCGGCCGGCAACCGCGACACGATGACGGACTTCAACCATTCGCTGATGCTGGGC
CTGCGCTACGAATTCAATCCGGCCCCGCCCCCGCCCCCGCCGGCCCCCGAGCCGGCCGCCCCCGCCCCGACGCAGAGCCG
CACCTATCTGGTGTTCTTCGACTGGGACCAGGCCGTGCTGACCGATCGCGCGCGCGCCATCGTGGCGACGGCGGCGCAGG
CATCGACCCGCACCCAGACGACGCGGATCGAGGTCGACGGCTATACCGACAATTCCGCCGCCCATCCCGGCCCACGGGGC
GCGCGCTACAACATGGCGCTGTCGGTCCGCCGCGCGCAGGCGGTCCAGGCCGAGTTGATCCGCGACGGCGTGCCCGGCAC
GGCGATCGACGTCCACGGCTTCGGCGAGACCCACCCGCTGGTGGCAACCGGCCCCAACACCCGCGAACCGCAGAACCGGC
GGGTCGAGATCATCCTGCACTGA

Upstream 100 bases:

>100_bases
CTTTCGGCAAAAGAAGGCAATGACTGAAAGGCCTGCCGAAGGACGCGTTCACTCGACCGGACAGCGTACCGATAATGTCC
GGCGAAGGGAGAAGAGACAT

Downstream 100 bases:

>100_bases
CCGGGGCAGGAGGGCCCGCACCGCCTTCATGTTCCTGCGTCAACTGACCTATCTGATCGCCCTCGACCAGTTCCGGCACT
TTTCCCGCGCCGCCGAAAGC

Product: outer membrane protein

Products: NA

Alternate protein names: OMPC [H]

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTVRHGLLAGSFLAATLAFGSVLSVAPAHAQPVQGLYVAGEGGASFNQDQRVRSSPNFPDGRDSYHTGATGIGSIGWGLG
NGFRVEVEGDYRNNGLKNFGSAGVPSSHVGGRQQTYGVMANALFDLDIGKSWLFPYFGAGVGYAWQAMNASVTAPNFSQQ
IGGTFGNFAYQGIFGLAFPVPWVVGLSATAEYRFWTMLGPQSHGARSIGTVGGYDTTRAYGPAAGNRDTMTDFNHSLMLG
LRYEFNPAPPPPPPAPEPAAPAPTQSRTYLVFFDWDQAVLTDRARAIVATAAQASTRTQTTRIEVDGYTDNSAAHPGPRG
ARYNMALSVRRAQAVQAELIRDGVPGTAIDVHGFGETHPLVATGPNTREPQNRRVEIILH

Sequences:

>Translated_380_residues
MTVRHGLLAGSFLAATLAFGSVLSVAPAHAQPVQGLYVAGEGGASFNQDQRVRSSPNFPDGRDSYHTGATGIGSIGWGLG
NGFRVEVEGDYRNNGLKNFGSAGVPSSHVGGRQQTYGVMANALFDLDIGKSWLFPYFGAGVGYAWQAMNASVTAPNFSQQ
IGGTFGNFAYQGIFGLAFPVPWVVGLSATAEYRFWTMLGPQSHGARSIGTVGGYDTTRAYGPAAGNRDTMTDFNHSLMLG
LRYEFNPAPPPPPPAPEPAAPAPTQSRTYLVFFDWDQAVLTDRARAIVATAAQASTRTQTTRIEVDGYTDNSAAHPGPRG
ARYNMALSVRRAQAVQAELIRDGVPGTAIDVHGFGETHPLVATGPNTREPQNRRVEIILH
>Mature_379_residues
TVRHGLLAGSFLAATLAFGSVLSVAPAHAQPVQGLYVAGEGGASFNQDQRVRSSPNFPDGRDSYHTGATGIGSIGWGLGN
GFRVEVEGDYRNNGLKNFGSAGVPSSHVGGRQQTYGVMANALFDLDIGKSWLFPYFGAGVGYAWQAMNASVTAPNFSQQI
GGTFGNFAYQGIFGLAFPVPWVVGLSATAEYRFWTMLGPQSHGARSIGTVGGYDTTRAYGPAAGNRDTMTDFNHSLMLGL
RYEFNPAPPPPPPAPEPAAPAPTQSRTYLVFFDWDQAVLTDRARAIVATAAQASTRTQTTRIEVDGYTDNSAAHPGPRGA
RYNMALSVRRAQAVQAELIRDGVPGTAIDVHGFGETHPLVATGPNTREPQNRRVEIILH

Specific function: Growth enhancer [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 40403; Mature: 40272

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRHGLLAGSFLAATLAFGSVLSVAPAHAQPVQGLYVAGEGGASFNQDQRVRSSPNFPD
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCC
GRDSYHTGATGIGSIGWGLGNGFRVEVEGDYRNNGLKNFGSAGVPSSHVGGRQQTYGVMA
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NALFDLDIGKSWLFPYFGAGVGYAWQAMNASVTAPNFSQQIGGTFGNFAYQGIFGLAFPV
HHEEEECCCCHHHCHHHCCCCCCEEHHCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHCH
PWVVGLSATAEYRFWTMLGPQSHGARSIGTVGGYDTTRAYGPAAGNRDTMTDFNHSLMLG
HHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LRYEFNPAPPPPPPAPEPAAPAPTQSRTYLVFFDWDQAVLTDRARAIVATAAQASTRTQT
EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHEEEEEHHHCCCCCEE
TRIEVDGYTDNSAAHPGPRGARYNMALSVRRAQAVQAELIRDGVPGTAIDVHGFGETHPL
EEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCE
VATGPNTREPQNRRVEIILH
EEECCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
TVRHGLLAGSFLAATLAFGSVLSVAPAHAQPVQGLYVAGEGGASFNQDQRVRSSPNFPD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCHHHCCCCCCC
GRDSYHTGATGIGSIGWGLGNGFRVEVEGDYRNNGLKNFGSAGVPSSHVGGRQQTYGVMA
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
NALFDLDIGKSWLFPYFGAGVGYAWQAMNASVTAPNFSQQIGGTFGNFAYQGIFGLAFPV
HHEEEECCCCHHHCHHHCCCCCCEEHHCCCEEECCCHHHHHCCCHHHHHHHHHHHHHHCH
PWVVGLSATAEYRFWTMLGPQSHGARSIGTVGGYDTTRAYGPAAGNRDTMTDFNHSLMLG
HHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
LRYEFNPAPPPPPPAPEPAAPAPTQSRTYLVFFDWDQAVLTDRARAIVATAAQASTRTQT
EEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHEEEEEHHHCCCCCEE
TRIEVDGYTDNSAAHPGPRGARYNMALSVRRAQAVQAELIRDGVPGTAIDVHGFGETHPL
EEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCE
VATGPNTREPQNRRVEIILH
EEECCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA