Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

Click here to switch to the map view.

The map label for this gene is 162145867

Identifier: 162145867

GI number: 162145867

Start: 27606

End: 28808

Strand: Direct

Name: 162145867

Synonym: GDI_0028

Alternate gene names: NA

Gene position: 27606-28808 (Clockwise)

Preceding gene: 162145866

Following gene: 162145871

Centisome position: 0.7

GC content: 63.76

Gene sequence:

>1203_bases
ATGACCGACGAGAAGATGGCGCTGCTGGAGCTTGTGGAGCAAGCGTCGGATGGCGATTTTGTTCGTGAGATGCTGGCGTT
CGCTGCCGATCGGATGATGGAGATGGAGGTTGAGGCCCGGACCGGTGCGCCGCTTGGCGCGCGTTCGGCCTCCCGCTCGA
CCCAACGCAACGGCTACCGCGCTCGGAACTGGGACACCCGGGCGGGCACGGTGGAGCTTGCGATCCCGAAGCTACGCAAG
GGCAGCTATTTCCCGACCTTCCTGGAGCCGCGGAAAACGGCGGAAAAGGCACTGCTGGCGGTCATCCAGGAAGCCTACGT
CCAGGGTATTTCCACGCGATCGGTCGATGATCTCGTCCGCGCGATGGGCGCCGGGGGCATCTCCAAAAGCCAGGTCAGTC
GTCTGGTGGGCGAGATCGACGAACGGGTCAACAGCTTCCTGTCTCGGCCGATCGAGGGCGATCCATATGACAAGTATCTC
TGGATCGACGCCACCTATCTGAAACTGCGCCAGGGTGGCCGGATTGTCTCGATTGCCGTGATAATCGCCGTGGGCGTAAA
TACGGACGGCCGTCGTGAGGTGCTCGGCGTGGCGACGGGACCGTCCGAAGCGGAAGCGTTCTGGACGGATTTCCTGCGCT
CCCTGGCCGATCGCGGCCTGCGCGGCGTGAAGTTGGTGGTGGCCGACGCGCATGCCGGACTGCGGGCCGCGGCCGGTCGC
GTGTTCAATGCGACCCTGCAACGCTGCCGGGTGCACTGGCTGCGCAATGCGCTCGCCCATGCCCATGCGAAGCAGCGTCC
TGCCATCTCGGCCCTGTTGCGCACGATCTTCACGCAGGAAACCGCCGAGGATGCGTCACGCCAATGGCGGCACGTCACCG
ACAAGCTGCGCGAAGGCTTTCCGAAGCTGGCCGAATTCATGAAGCGGACGGAAGTGGACGTGCTTGCCTACATGGGCTTT
CCTCGGGAGCATTGGACGCAAATCTCGTCGACGAACCCGATCGAGCGGGTGAACAGGGAGATCAAGCGTCGCTGCGACGT
CATCGGCATTTTCCCCAACGATGCCGCCATTATCCGCCTCGTCGGCGCGCTGATGCTCGAACAGAACGACGAGTGGGCGG
TCTGCCGACGTTACATGACGCTGGAAGGACTGGCCGCCATCAGCCATAATCCCACAATCAGCCTGCCCGCCGTGGCCGCC
TGA

Upstream 100 bases:

>100_bases
GTGTCCCGAGGTGTGGTGTAGGAGCGAGTCTGGCTGCTGAGGCGGCCATCGCCGGTCTTTGATAGGGTTCGGGTGCGAAC
TGAACCTGAAGGACCTGACG

Downstream 100 bases:

>100_bases
TAACCTCGAACCCTTCGAGGAACGGTGCTCCTACACCACACCTCGGGACACAGCCGACCGGACTCGATGCCATACTGGCA
TCTATCACAGGTTAGACTCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYRARNWDTRAGTVELAIPKLRK
GSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVRAMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGDPYDKYL
WIDATYLKLRQGGRIVSIAVIIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGR
VFNATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPKLAEFMKRTEVDVLAYMGF
PREHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA

Sequences:

>Translated_400_residues
MTDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYRARNWDTRAGTVELAIPKLRK
GSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVRAMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGDPYDKYL
WIDATYLKLRQGGRIVSIAVIIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGR
VFNATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPKLAEFMKRTEVDVLAYMGF
PREHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA
>Mature_399_residues
TDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYRARNWDTRAGTVELAIPKLRKG
SYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVRAMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGDPYDKYLW
IDATYLKLRQGGRIVSIAVIIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGRV
FNATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGFPKLAEFMKRTEVDVLAYMGFP
REHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRLVGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 44548; Mature: 44416

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYR
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
ARNWDTRAGTVELAIPKLRKGSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGDPYDKYLWIDATYLKLRQGGRIVSIAV
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEE
IIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGR
EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
VFNATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PKLAEFMKRTEVDVLAYMGFPREHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRL
HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHH
VGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TDEKMALLELVEQASDGDFVREMLAFAADRMMEMEVEARTGAPLGARSASRSTQRNGYR
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
ARNWDTRAGTVELAIPKLRKGSYFPTFLEPRKTAEKALLAVIQEAYVQGISTRSVDDLVR
CCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AMGAGGISKSQVSRLVGEIDERVNSFLSRPIEGDPYDKYLWIDATYLKLRQGGRIVSIAV
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEEE
IIAVGVNTDGRREVLGVATGPSEAEAFWTDFLRSLADRGLRGVKLVVADAHAGLRAAAGR
EEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHH
VFNATLQRCRVHWLRNALAHAHAKQRPAISALLRTIFTQETAEDASRQWRHVTDKLREGF
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PKLAEFMKRTEVDVLAYMGFPREHWTQISSTNPIERVNREIKRRCDVIGIFPNDAAIIRL
HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHH
VGALMLEQNDEWAVCRRYMTLEGLAAISHNPTISLPAVAA
HHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1663885; 12788972 [H]