| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
Click here to switch to the map view.
The map label for this gene is aroE [H]
Identifier: 162145857
GI number: 162145857
Start: 14515
End: 15372
Strand: Direct
Name: aroE [H]
Synonym: GDI_0015
Alternate gene names: 162145857
Gene position: 14515-15372 (Clockwise)
Preceding gene: 162145854
Following gene: 162145858
Centisome position: 0.37
GC content: 65.5
Gene sequence:
>858_bases ATGACCGACAAGAGCTTCCTGAGTATCCTGACGGGATCTTTCTCCACGCCGTGTGCCGACAACCCGACGGTCGCCATGAT CGAGGCGGCCTATCGCCATCACGATATCGACGCGCGCTACATCAACTGCGATGTGAAACCCGACAATCTGGCCGATGCCG TTCGCGGCGCGAAGGCGATGGAATGGGTGGGATTCAATTGCTCGCTGCCGCATAAGGTCGCGGTGATCCAGCACCTGGAC GCATTGTCCGAGGCCGCGCGGATTATCGGGGCGGTCAACTGCGTGACGATCCGCGACGGCAAGCTGACCGGCGACAACAC GGACGGCAAGGGCTTCCTGGCCTCGCTGAAGGACGTCACCGACCCGCGCGGCAAGAAGATCCTGCTGCTGGGCGCGGGCG GCGCCGCCCGGGCGATTGCCGTGGAACTGGGACTGGCCGGCACGGCCCATATCACCGTCATCAACCGCGACCCGGCGAAG GCCGAAACCATCGCGGCGCTGGTGCGCGACAATACCCGAAGCGACGCGACCGCGAAGCCATGGGACGGCGAGGCGCGCGT CCCGGACGACGTCGATATCGTCATCAACGCCACCTCGATCGGCCTGGGCGACAAGGAGGCCATTCCGCCCATCGCGCTGG ACAGCCTGAAGAAAGGGCACATCGTCGCCGACGTGATCCCGAATCCCCCCAGGACACACCTGCTCCGCGAGGCCAAGGCG CGGGGCTGCACGCCGCTCGACGGGCTGGGCATGCTCGTCAATCAGGGCGTGATCGGCGTGGAATTGTGGCTGGGCAAGAC GCTGGATGCCGGCGTCATGAAGCGCGCGCTCCAGGACATTTTCGGTTCGTCCGACTGA
Upstream 100 bases:
>100_bases TCACGGCTTTAACTTTGCGTCATGTCCCAACCTTGGACATACCGATACCATTGTGCATAGCTATGCAAGACAGCCGCAAC CCTAGTTTCCGGAGCGCCGC
Downstream 100 bases:
>100_bases TGTGAACGACGGCAGCGCCCGATCGCGAAGGGACCCGGGGAATGGCAAGCTCAAGCACGGCCGACATTGCGCGTGACACC GAAAACAGCGAAAGGCACCG
Product: shikimate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTDKSFLSILTGSFSTPCADNPTVAMIEAAYRHHDIDARYINCDVKPDNLADAVRGAKAMEWVGFNCSLPHKVAVIQHLD ALSEAARIIGAVNCVTIRDGKLTGDNTDGKGFLASLKDVTDPRGKKILLLGAGGAARAIAVELGLAGTAHITVINRDPAK AETIAALVRDNTRSDATAKPWDGEARVPDDVDIVINATSIGLGDKEAIPPIALDSLKKGHIVADVIPNPPRTHLLREAKA RGCTPLDGLGMLVNQGVIGVELWLGKTLDAGVMKRALQDIFGSSD
Sequences:
>Translated_285_residues MTDKSFLSILTGSFSTPCADNPTVAMIEAAYRHHDIDARYINCDVKPDNLADAVRGAKAMEWVGFNCSLPHKVAVIQHLD ALSEAARIIGAVNCVTIRDGKLTGDNTDGKGFLASLKDVTDPRGKKILLLGAGGAARAIAVELGLAGTAHITVINRDPAK AETIAALVRDNTRSDATAKPWDGEARVPDDVDIVINATSIGLGDKEAIPPIALDSLKKGHIVADVIPNPPRTHLLREAKA RGCTPLDGLGMLVNQGVIGVELWLGKTLDAGVMKRALQDIFGSSD >Mature_284_residues TDKSFLSILTGSFSTPCADNPTVAMIEAAYRHHDIDARYINCDVKPDNLADAVRGAKAMEWVGFNCSLPHKVAVIQHLDA LSEAARIIGAVNCVTIRDGKLTGDNTDGKGFLASLKDVTDPRGKKILLLGAGGAARAIAVELGLAGTAHITVINRDPAKA ETIAALVRDNTRSDATAKPWDGEARVPDDVDIVINATSIGLGDKEAIPPIALDSLKKGHIVADVIPNPPRTHLLREAKAR GCTPLDGLGMLVNQGVIGVELWLGKTLDAGVMKRALQDIFGSSD
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=278, Percent_Identity=31.294964028777, Blast_Score=128, Evalue=4e-31, Organism=Escherichia coli, GI1789675, Length=271, Percent_Identity=30.6273062730627, Blast_Score=97, Evalue=1e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 30065; Mature: 29934
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKSFLSILTGSFSTPCADNPTVAMIEAAYRHHDIDARYINCDVKPDNLADAVRGAKAM CCCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCEEEEECCCCCHHHHHHHCCHHH EWVGFNCSLPHKVAVIQHLDALSEAARIIGAVNCVTIRDGKLTGDNTDGKGFLASLKDVT EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEECCCCCCCCHHHHHHHHCC DPRGKKILLLGAGGAARAIAVELGLAGTAHITVINRDPAKAETIAALVRDNTRSDATAKP CCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCC WDGEARVPDDVDIVINATSIGLGDKEAIPPIALDSLKKGHIVADVIPNPPRTHLLREAKA CCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHH RGCTPLDGLGMLVNQGVIGVELWLGKTLDAGVMKRALQDIFGSSD CCCCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TDKSFLSILTGSFSTPCADNPTVAMIEAAYRHHDIDARYINCDVKPDNLADAVRGAKAM CCHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHCCCCCEEEEECCCCCHHHHHHHCCHHH EWVGFNCSLPHKVAVIQHLDALSEAARIIGAVNCVTIRDGKLTGDNTDGKGFLASLKDVT EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEECCCCCCCCHHHHHHHHCC DPRGKKILLLGAGGAARAIAVELGLAGTAHITVINRDPAKAETIAALVRDNTRSDATAKP CCCCCEEEEEECCCCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCC WDGEARVPDDVDIVINATSIGLGDKEAIPPIALDSLKKGHIVADVIPNPPRTHLLREAKA CCCCCCCCCCCEEEEEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHH RGCTPLDGLGMLVNQGVIGVELWLGKTLDAGVMKRALQDIFGSSD CCCCCCHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]