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The map label for this gene is ygfA [H]

Identifier: 161870968

GI number: 161870968

Start: 2100654

End: 2101313

Strand: Reverse

Name: ygfA [H]

Synonym: NMCC_2063

Alternate gene names: 161870968

Gene position: 2101313-2100654 (Counterclockwise)

Preceding gene: 161870989

Following gene: 161870967

Centisome position: 97.58

GC content: 56.67

Gene sequence:

>660_bases
TTGTGTGCGTCCTGTTTGAATGTTAACAAAATCGTTATAATCGCAACATTCTACCGCAATCCTGAAAGGCCGTCTGAAAT
GAGGAATGAGGAAAAACGCGCCCTGCGCCGCGAATTGCGCGGGCGGCGTTCGCAAATGGGGCGGGACGTGCGGGCGGCGG
CAACGGTAAAAATTAACCGCCTGCTCAAACGTTATATCAAGCACGGTCGGAAAATCGGCGTGTATTGGCCGATGGGCAAG
GAATTGCGTTTGGACGGCTTTGTCCGCGCGGCGCAAAAACGCGGCGCAAAACTTTATCTGCCTTATATCGAACCGCGTTC
GCGGCGGATGTGGTTTACGCCGTATCCTGAAAGCGGAATGGAACGGGAGCGCATACGGGGCAGGGCGAGGTTGAACGTGC
CGCAGTTTGCAGGGCGCAAAATCCGCGTGCACGGTTTGTCGGTATTGCTCGTTCCGCTTGTCGGCATAGACCGCGAAGGC
TACCGTTTGGGGCAGGCAGGCGGCTATTACGATGCGACGCTTGCAGCGATGAAATACCGTTTGCAGGCAAAAACCGTGGG
CGTGGGCTTTGCCTGCCAGTTGGTGGACAGACTGTCGGTCGAGGCGCACGACCTGCCGCTGGACGGTTTTGTGTCGGAGG
CGGGGATATTGTGTTTTTAG

Upstream 100 bases:

>100_bases
GCCCAAAAAACCAAATAAATCAAGGCGCGCGCAATACTCGGCTGCGCGGCGGAAAACATCACGGCAACAAAAAGATAGCC
GATGGCGACGATGTGCCACA

Downstream 100 bases:

>100_bases
CCGTTCAGACGGCATTTTGAACGGAAATGCCGTCTGAAGGTGGAATATTGGGAGAAAAGGATGTCGGAAAAGATAATACT
GCCGGTCTTGTCGTTGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MCASCLNVNKIVIIATFYRNPERPSEMRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKHGRKIGVYWPMGK
ELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGRARLNVPQFAGRKIRVHGLSVLLVPLVGIDREG
YRLGQAGGYYDATLAAMKYRLQAKTVGVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF

Sequences:

>Translated_219_residues
MCASCLNVNKIVIIATFYRNPERPSEMRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKHGRKIGVYWPMGK
ELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGRARLNVPQFAGRKIRVHGLSVLLVPLVGIDREG
YRLGQAGGYYDATLAAMKYRLQAKTVGVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF
>Mature_219_residues
MCASCLNVNKIVIIATFYRNPERPSEMRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKHGRKIGVYWPMGK
ELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGRARLNVPQFAGRKIRVHGLSVLLVPLVGIDREG
YRLGQAGGYYDATLAAMKYRLQAKTVGVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=151, Percent_Identity=29.8013245033113, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 25098; Mature: 25098

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCASCLNVNKIVIIATFYRNPERPSEMRNEEKRALRRELRGRRSQMGRDVRAAATVKINR
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLKRYIKHGRKIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGM
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCC
ERERIRGRARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYR
CHHHHCCCCCCCCHHHCCCEEEEECHHEEEEHHHCCCCCCCEECCCCCCHHHHHHHHHHH
LQAKTVGVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF
HHHEEECCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MCASCLNVNKIVIIATFYRNPERPSEMRNEEKRALRRELRGRRSQMGRDVRAAATVKINR
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LLKRYIKHGRKIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGM
HHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEEEECCCCCCCC
ERERIRGRARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYR
CHHHHCCCCCCCCHHHCCCEEEEECHHEEEEHHHCCCCCCCEECCCCCCHHHHHHHHHHH
LQAKTVGVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF
HHHEEECCHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]