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The map label for this gene is mtrC [H]

Identifier: 161870562

GI number: 161870562

Start: 1658680

End: 1659894

Strand: Reverse

Name: mtrC [H]

Synonym: NMCC_1628

Alternate gene names: 161870562

Gene position: 1659894-1658680 (Counterclockwise)

Preceding gene: 161870564

Following gene: 161870561

Centisome position: 77.08

GC content: 58.68

Gene sequence:

>1215_bases
ATGCGTGCGGCCGCGTTGGCTGCCGCCGTTGCATTGGTACTGTCGTCTTGCGGTAAAGGCGGAGACGCGGCGCAGGGCGG
GCAGCCTGCTGGTCGGGAAGCACCGGCTCCCGTCGTCGGTGTCGTAACCGTCCATCCGCAAACCGTCGCATTGACCGTCG
AGTTGCCGGGGCGTTTGGAATCGCTGCGTACCGCCGATGTCCGCGCCCAAGTCGGCGGCATCATCCAAAAACGCCTGTTC
CAAGAAGGCAGTTATGTCCGTGCCGGACAGCCGCTGTATCAGATCGACAGTTCCACTTATGAAGCAGGTCTGGAAAGCGC
ACGCGCGCAACTGGCAACGGCTCAGGCAACGCTTGCCAAAGCGGATGCGGATTTGGCGCGGTACAAGCCTTTGGTTGCCG
CCGAAGCCGTCAGCCGGCAGGAATACGATGCTGCGGTAACGGCGAAACGTTCTGCCGAGGCAGGTGTCAAAGCAGCACAG
GCGGCAATCAAATCTGCCGGCATTAATCTGAACCGTTCGCGCATTACCGCGCCGATTTCCGGCTTTATCGGTCAGTCCAA
AGTTTCCGAAGGTACGCTGTTGAATGCGGGCGATACGACCGTGCTGGCAACCATCCGCCAAACCAATCCGATGTATGTGA
ACGTTACCCAGTCTGCATCCGAAGTGATGAAATTGCGCCGTCAGATAGCCGAAGGCAAACTGCTGGCGGCGGATGGTGTG
ATTGCGGTCGGCATCAAATTTGACGACGGCACAGTTTACCCTGAAAAAGGCCGCCTGCTGTTTGCCGATCCGACCGTCAA
CGAATCGACCGGTCAGATTACCCTGCGCGCCGCCGTACCGAACGATCAGAATATCCTGATGCCCGGCCTGTATGTGCGCG
TGCTGATGGACCAAGTGGCGGTGGATAACGCATTCATCGTGCCGCAGCAGGCGGTAACGCGCGGTGCGAAAGATACCGTG
ATGATTGTGAACGCCCAAGGCGGTATGGAACCCCGCGAGGTAACGGTCGCGCAACAGCAGGGTACGAATTGGATTGTTAC
GTCGGGTCTGAAGGACGGGGACAAGGTGGTTGTGGAAGGCATCAGTATCGCCGGTATAACGGGTGCGAAAAAGGTAACGC
CCAAAGAATGGGCGCCGTCTGAAAACCAAGCCGCCGCGCCTCAATCCGGCGTTCAGACGGCATCTGAAGCCAAAACTGCT
TCTGAAGCGGAATAA

Upstream 100 bases:

>100_bases
TTTTTGTTAATCCACTATAAGAATGCCTGTTGATTGGCAAAACCCTTTACATCAAACCAGACAGATAGGATAAATAATGG
CTTTTTATGCTTTTAAGGCG

Downstream 100 bases:

>100_bases
GGAAGGCATCGATGGCTAAATTTTTTATCGACCGCCCCATTTTCGCGTGGGTTATTTCGATTTTCATTATTGCGGCGGGT
ATTTTCGGCATTAAAAGCCT

Product: membrane fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPAPVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLF
QEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQ
AAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKLLAADGV
IAVGIKFDDGTVYPEKGRLLFADPTVNESTGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFIVPQQAVTRGAKDTV
MIVNAQGGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWAPSENQAAAPQSGVQTASEAKTA
SEAE

Sequences:

>Translated_404_residues
MRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPAPVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLF
QEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQ
AAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKLLAADGV
IAVGIKFDDGTVYPEKGRLLFADPTVNESTGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFIVPQQAVTRGAKDTV
MIVNAQGGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWAPSENQAAAPQSGVQTASEAKTA
SEAE
>Mature_404_residues
MRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPAPVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLF
QEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQ
AAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKLLAADGV
IAVGIKFDDGTVYPEKGRLLFADPTVNESTGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFIVPQQAVTRGAKDTV
MIVNAQGGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWAPSENQAAAPQSGVQTASEAKTA
SEAE

Specific function: Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789665, Length=356, Percent_Identity=44.6629213483146, Blast_Score=276, Evalue=2e-75,
Organism=Escherichia coli, GI1786668, Length=392, Percent_Identity=42.6020408163265, Blast_Score=270, Evalue=1e-73,
Organism=Escherichia coli, GI1789929, Length=350, Percent_Identity=39.7142857142857, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI87082036, Length=339, Percent_Identity=32.7433628318584, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI87081796, Length=342, Percent_Identity=28.0701754385965, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081951, Length=114, Percent_Identity=35.9649122807018, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 41982; Mature: 41982

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPAPVVGVVTVHPQTVALTVELPGRLE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCHHH
SLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLAK
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
ADADLARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPIS
HCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCHH
GFIGQSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKLLAADGV
HHCCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCE
IAVGIKFDDGTVYPEKGRLLFADPTVNESTGQITLRAAVPNDQNILMPGLYVRVLMDQVA
EEEEEEECCCEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEECCHHHHHHHHHHHH
VDNAFIVPQQAVTRGAKDTVMIVNAQGGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEG
CCCEEECCHHHHHCCCCCEEEEEECCCCCCCCEEEEEHHCCCCEEEECCCCCCCEEEEEE
ISIAGITGAKKVTPKEWAPSENQAAAPQSGVQTASEAKTASEAE
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPAPVVGVVTVHPQTVALTVELPGRLE
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCHHH
SLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLAK
HHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
ADADLARYKPLVAAEAVSRQEYDAAVTAKRSAEAGVKAAQAAIKSAGINLNRSRITAPIS
HCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCHH
GFIGQSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKLLAADGV
HHCCCCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCE
IAVGIKFDDGTVYPEKGRLLFADPTVNESTGQITLRAAVPNDQNILMPGLYVRVLMDQVA
EEEEEEECCCEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCEECCHHHHHHHHHHHH
VDNAFIVPQQAVTRGAKDTVMIVNAQGGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEG
CCCEEECCHHHHHCCCCCEEEEEECCCCCCCCEEEEEHHCCCCEEEECCCCCCCEEEEEE
ISIAGITGAKKVTPKEWAPSENQAAAPQSGVQTASEAKTASEAE
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8196548 [H]