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The map label for this gene is ydjA [C]

Identifier: 161870481

GI number: 161870481

Start: 1565681

End: 1566238

Strand: Reverse

Name: ydjA [C]

Synonym: NMCC_1537

Alternate gene names: 161870481

Gene position: 1566238-1565681 (Counterclockwise)

Preceding gene: 161870482

Following gene: 161870476

Centisome position: 72.73

GC content: 53.41

Gene sequence:

>558_bases
ATGGATGCTTTAAAATTATTGACGAACCGCCGATCTTCCAAAAAGCTGAAGCACCCCGCCCCCGATGCGGCGGAGTTGGA
GCAAATATTTCAGGCGGCAACCCAAGTTCCCGATCACGGCAATATGCGCCCGTTCCGTTTTACCGTGATTCAAGGCGAGG
TAGGATTGCAACGTTTTCGCGATGTGTTGAAGCAAACGGTTGCCGAATTGAATTTCGGCGACGATGCGATGAAAAAGGCG
GAAAAAGTAGGCAATATGGCGCCGATGGTTATCGGGGTAACGTTTGCGCCGAACCGCGATGTGCCTAAGCCGAAACCGGA
ATGGGAGCAGATGCTGACGGCGGGTTGTGCGGCGTATGCGCTGCAACTGGCGGCAACGGCGCAAGGTTTCGATAATGTGT
GGATAACGGGGATGTGGGTCAACAGCCCCCTGTTGCGTGAGGCTTTCGGATGTGCGGATAAGGATAAAATCATCGGGCTG
ATGATGGTCGGCACGCCGACAGAGGAAGTGCATAAGCCCAAGAATACCGATTTGGAAGCGTTTGTCAGCCATTGGTAA

Upstream 100 bases:

>100_bases
GGCAGCCTGCCGCCGTCCGCGCTGATGCCGGATATGCCGTCTGAAGCCTTCGGACGGCATATGTGTCCGAACACCCGACC
GATGACCGGAGTATAACGAT

Downstream 100 bases:

>100_bases
ACGGAATCTCAAGCAAAATGCCGTCTGAAAGGCTTTCAGACGGCATTTTTCCATGCGTTTTAAACCGGATTCATGAAACG
CCCGATGCGTTCGGCGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRPFRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKA
EKVGNMAPMVIGVTFAPNRDVPKPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
MMVGTPTEEVHKPKNTDLEAFVSHW

Sequences:

>Translated_185_residues
MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRPFRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKA
EKVGNMAPMVIGVTFAPNRDVPKPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
MMVGTPTEEVHKPKNTDLEAFVSHW
>Mature_185_residues
MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRPFRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKA
EKVGNMAPMVIGVTFAPNRDVPKPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
MMVGTPTEEVHKPKNTDLEAFVSHW

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=188, Percent_Identity=42.5531914893617, Blast_Score=151, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20550; Mature: 20550

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRPFRFTVIQGEVGLQRFR
CCHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHH
DVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVPKPKPEWEQMLTAGCAAYA
HHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
LQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGLMMVGTPTEEVHKPKNTDLEA
HHHHHHHCCCCCEEEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCCCCHHH
FVSHW
HHHCC
>Mature Secondary Structure
MDALKLLTNRRSSKKLKHPAPDAAELEQIFQAATQVPDHGNMRPFRFTVIQGEVGLQRFR
CCHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHHHHHH
DVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVPKPKPEWEQMLTAGCAAYA
HHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
LQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGLMMVGTPTEEVHKPKNTDLEA
HHHHHHHCCCCCEEEEEEEECCHHHHHHHCCCCCCCEEEEEEECCCHHHHCCCCCCCHHH
FVSHW
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]