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The map label for this gene is 161870440

Identifier: 161870440

GI number: 161870440

Start: 1517705

End: 1518136

Strand: Direct

Name: 161870440

Synonym: NMCC_1489

Alternate gene names: NA

Gene position: 1517705-1518136 (Clockwise)

Preceding gene: 161870439

Following gene: 161870441

Centisome position: 70.48

GC content: 50.46

Gene sequence:

>432_bases
ATGAACCAACTCGACCAACTTGGCACCCGTATCAACCTGATTTGCAATGTCTTCGACAAATGGATCGGGCAGCAGGATCT
GAATTACAACCTCTTTGCCGTACTTTATACCCTGGCAACCGAAGGCAGCCGCACGCAAAAGCATATCGGCGAAGAGTGGA
GTTTGCCCAAACAGACCGTTTCAGGCGTATGCAAAACCCTTGCCGGACAAGGGTTGATTGAATGGCAGGAAAGCGAACAG
GACCGGCGCGAACGGTTGCTGTCGCTGACCGAAAAAGGCAAAGCCCATGCCGCACCTTTAACAGAAAGCGCGCAGGAATT
CAGCGACAAAGTATTTGCCACATTCGGCGACAAGCGCACAACCCGGCTGTTTGCCGATTTGGATGCACTGGCTGAAGTGA
TGGAAAAAACAATCTCGGAAAATAAAAAATAG

Upstream 100 bases:

>100_bases
TTAGAGAATCGTTCTCTTTGAGCTAAGGCGAGGCAACGCCGTACTGGTTTTTGTTAATCCACTATAATCCGCACAAATTT
AGTCAATATCAAGACCAATT

Downstream 100 bases:

>100_bases
GGAGCAAATATGTGGAAAATGTTGAAACACATAGCCCAACCCACCGCAAGCGTCTGCTCGGCACGTTTTCCCTGGTCGGA
CTGGAAAACCTTTGGATGCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: MarR Family Transcriptional Regulator; Transcriptional Regulator MarR Family; MarR Protein

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQESEQ
DRRERLLSLTEKGKAHAAPLTESAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK

Sequences:

>Translated_143_residues
MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQESEQ
DRRERLLSLTEKGKAHAAPLTESAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK
>Mature_143_residues
MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIGEEWSLPKQTVSGVCKTLAGQGLIEWQESEQ
DRRERLLSLTEKGKAHAAPLTESAQEFSDKVFATFGDKRTTRLFADLDALAEVMEKTISENKK

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16194; Mature: 16194

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIGEEWSLPKQTV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHH
SGVCKTLAGQGLIEWQESEQDRRERLLSLTEKGKAHAAPLTESAQEFSDKVFATFGDKRT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHH
TRLFADLDALAEVMEKTISENKK
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQLDQLGTRINLICNVFDKWIGQQDLNYNLFAVLYTLATEGSRTQKHIGEEWSLPKQTV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHH
SGVCKTLAGQGLIEWQESEQDRRERLLSLTEKGKAHAAPLTESAQEFSDKVFATFGDKRT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHH
TRLFADLDALAEVMEKTISENKK
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA