Click here to switch to the map view.

The map label for this gene is 161870390

Identifier: 161870390

GI number: 161870390

Start: 1457674

End: 1458342

Strand: Reverse

Name: 161870390

Synonym: NMCC_1437

Alternate gene names: NA

Gene position: 1458342-1457674 (Counterclockwise)

Preceding gene: 161870391

Following gene: 161870389

Centisome position: 67.72

GC content: 60.84

Gene sequence:

>669_bases
GTGCCGTCAAATTACTTTCATACGCGCGAACGATTGGGTGCTTTGGGCGGCATCGTGCAACATCATACCGCCTTGTACCG
CAGCGTGGCGGTATATGAACCGGCTGTGCTTATCGTGCGGCGCGGAAGCAAGAAGCTGCGGTGGGCGAGGCGCGAATTGA
GGATTGCGGCGGGTGAGGCGGTCGCCTTGGCAGGCGGGCAGACGTTTGACGTTATTAATATTCCCGATTCAGACGGCCTC
TATCAGGCGCAATGGATTGCTTTCGAACAGGAAGCCATAGAAAGGTTTGCCGCACAATACGGGACGGCGCAGGCAGTGTG
CGATGCGGTGAAGCTGCCGCACCCCGGGCGGATGGGCGCGGCGTTTGATTATGCGGCGGCGGTGCTGACGGATGAAGAAG
TGCCGCACAATGCGGCGGAGGTCGCGCTTTGCGGCGTGTTGGCGTGGTTGCAGCATGACGGCATCGGTTTTGCCGTGTAC
GAAGGCGTCAACCTGATGCGGCAAATCCGCAAACTGATTACCGCCGATATGGCTGCGGACTGGTCGTCGGCGATGTTGGC
GCAGCGGCTTAATTGCAGCGAGGTCGCGTTGCGGCGGTGGACATCGGCGGGAATGTCGGCGACCACCCGGTGCATCCAGC
CCAGTCCGGTCGGCGCGTCTTTATCGTAA

Upstream 100 bases:

>100_bases
GGGCGGTGGGATTTTGGTTTATTTTTTGGGAAGTAACCCTTTCCAAATCAGGGTAAACAGGGCTGCGCCTTATGTGCGGC
CCTGCGTGTTGGAGATAATA

Downstream 100 bases:

>100_bases
ACGGTCAGGACGAAACTTTTTGTCCCGGCGGGCGGATTTTTCCACGACAGCGCGGGCGAAGCATTGCCGCCCGAACAGCC
AAATCCGTAAGGCGCGCTCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: AraC Protein; AraC-Type Regulatory Protein

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MPSNYFHTRERLGALGGIVQHHTALYRSVAVYEPAVLIVRRGSKKLRWARRELRIAAGEAVALAGGQTFDVINIPDSDGL
YQAQWIAFEQEAIERFAAQYGTAQAVCDAVKLPHPGRMGAAFDYAAAVLTDEEVPHNAAEVALCGVLAWLQHDGIGFAVY
EGVNLMRQIRKLITADMAADWSSAMLAQRLNCSEVALRRWTSAGMSATTRCIQPSPVGASLS

Sequences:

>Translated_222_residues
MPSNYFHTRERLGALGGIVQHHTALYRSVAVYEPAVLIVRRGSKKLRWARRELRIAAGEAVALAGGQTFDVINIPDSDGL
YQAQWIAFEQEAIERFAAQYGTAQAVCDAVKLPHPGRMGAAFDYAAAVLTDEEVPHNAAEVALCGVLAWLQHDGIGFAVY
EGVNLMRQIRKLITADMAADWSSAMLAQRLNCSEVALRRWTSAGMSATTRCIQPSPVGASLS
>Mature_221_residues
PSNYFHTRERLGALGGIVQHHTALYRSVAVYEPAVLIVRRGSKKLRWARRELRIAAGEAVALAGGQTFDVINIPDSDGLY
QAQWIAFEQEAIERFAAQYGTAQAVCDAVKLPHPGRMGAAFDYAAAVLTDEEVPHNAAEVALCGVLAWLQHDGIGFAVYE
GVNLMRQIRKLITADMAADWSSAMLAQRLNCSEVALRRWTSAGMSATTRCIQPSPVGASLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24142; Mature: 24011

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNYFHTRERLGALGGIVQHHTALYRSVAVYEPAVLIVRRGSKKLRWARRELRIAAGEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCE
VALAGGQTFDVINIPDSDGLYQAQWIAFEQEAIERFAAQYGTAQAVCDAVKLPHPGRMGA
EEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
AFDYAAAVLTDEEVPHNAAEVALCGVLAWLQHDGIGFAVYEGVNLMRQIRKLITADMAAD
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
WSSAMLAQRLNCSEVALRRWTSAGMSATTRCIQPSPVGASLS
HHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PSNYFHTRERLGALGGIVQHHTALYRSVAVYEPAVLIVRRGSKKLRWARRELRIAAGEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCE
VALAGGQTFDVINIPDSDGLYQAQWIAFEQEAIERFAAQYGTAQAVCDAVKLPHPGRMGA
EEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCC
AFDYAAAVLTDEEVPHNAAEVALCGVLAWLQHDGIGFAVYEGVNLMRQIRKLITADMAAD
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
WSSAMLAQRLNCSEVALRRWTSAGMSATTRCIQPSPVGASLS
HHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA