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The map label for this gene is yecS [C]

Identifier: 161869734

GI number: 161869734

Start: 760432

End: 761148

Strand: Direct

Name: yecS [C]

Synonym: NMCC_0754

Alternate gene names: 161869734

Gene position: 760432-761148 (Clockwise)

Preceding gene: 161869733

Following gene: 161869735

Centisome position: 35.31

GC content: 52.58

Gene sequence:

>717_bases
GTGTTCAATAATTTCCTTGCTTCGCTGCCGTTTATGACGGAAACACGCGCCGATATGATTGTCAGCGCGTTTTTGCCTAT
GGTCAAAGCCGGCTTCGCGGTCTCTCTGCCTTTGGCGGCAGCTTCTTTCGTTATCGGTATGATGATTGCGGTAGCCGTGG
CTTTGGTGCGGATTATGCCCGCCGGCGGCATCGTGCGGAAAATCCTGCTGAAATTGGTGGAATTTTATATTTCCGTCATT
CGCGGTACGCCGCTGTTGGTTCAGCTTGTGATTGTGTTTTACGGGCTGCCTTCCGTCGGCATCTATATCGACCCGATTCC
TGCCGCCATCATCGGCTTTTCGCTCAATGTCGGCGCATATGCTTCCGAAACCATACGCGCGGCAATTTTGTCCGTACCGA
AAGGCCAATGGGAAGCAGGTTTCTCCATCGGCATGACCTATATGCAGACGTTCCGCCGCATCGTCGCGCCGCAGGCATTT
CGCGTTGCCGTGCCGCCTTTGAGCAACGAGTTTATCGGTTTGTTTAAAAACACCTCGCTCGCGGCAGTCGTGACGGTAAC
GGAATTGTTCCGCGTCGCGCAGGAAACGGCAAACCGCACTTATGACTTTTTGCCCGTCTATATCGAAGCCGCTTTGGTTT
ACTGGTGTTTTTGTAAAGTGCTGTTCCTGATTCAGGCGCGTTTGGAAAAACGTTTCGACCGCTACGTCGCCAAATAA

Upstream 100 bases:

>100_bases
AATGACGAAGCCGTGGCGAAATTCAGTACGGCAATCAACGAGCTGAAAGCCGACGGTACGCTGAAAAAACTGGGCGAACA
ATTCTTCGGAAAAGACATCA

Downstream 100 bases:

>100_bases
GGAGTTGTCATGATTAAAATCCGCAATATTCATAAGACCTTCGGCAAAAATACCATTTTGCGCGGCATCAATTTGGATGT
GTGCAAAGGGCAGGTGGTCG

Product: amino acid permease integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVI
RGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAK

Sequences:

>Translated_238_residues
MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVI
RGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAK
>Mature_238_residues
MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMPAGGIVRKILLKLVEFYISVI
RGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAK

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=210, Percent_Identity=48.5714285714286, Blast_Score=201, Evalue=4e-53,
Organism=Escherichia coli, GI1787030, Length=209, Percent_Identity=33.9712918660287, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1787086, Length=224, Percent_Identity=31.25, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI1788646, Length=229, Percent_Identity=31.4410480349345, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI87082239, Length=226, Percent_Identity=32.7433628318584, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1788645, Length=216, Percent_Identity=31.4814814814815, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787087, Length=133, Percent_Identity=35.3383458646617, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1786873, Length=216, Percent_Identity=29.6296296296296, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786874, Length=198, Percent_Identity=26.7676767676768, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI48994930, Length=154, Percent_Identity=31.8181818181818, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 26237; Mature: 26237

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMP
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAY
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCHH
ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCCH
AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFVIGMMIAVAVALVRIMP
CCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGGIVRKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIYIDPIPAAIIGFSLNVGAY
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCHH
ASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAFRVAVPPLSNEFIGLFKNTSL
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEECCCCCCHHHHHHCCCCH
AAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFCKVLFLIQARLEKRFDRYVAK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]