Click here to switch to the map view.

The map label for this gene is yicC [H]

Identifier: 161869653

GI number: 161869653

Start: 683428

End: 684312

Strand: Reverse

Name: yicC [H]

Synonym: NMCC_0670

Alternate gene names: 161869653

Gene position: 684312-683428 (Counterclockwise)

Preceding gene: 161869654

Following gene: 161869647

Centisome position: 31.78

GC content: 51.19

Gene sequence:

>885_bases
ATGAGCAGCGGAAATATCCACATCCACAGCATGACCGGATTTGCCAACGCGGCGGCAGAGTGCGGCAGCAAACGCATCAA
TCTCGACCTGCGTGCGGTCAACCACCGTTTTCTAGATATTCAAATCAGGATGCCCGACGATTTGCGCTATTTGGAAAGCG
GTATCCGCGAGAAAATTTCATCCCATATCGCACGCGGCAAAGTCGAATGCAAAATCCAAATTCAAGATGCGGAAAACGGC
AGTCAGTCCTTGGAACTGAATCGCGACTTGGTCGGACAGCTTGCCGAAATCAACAAAGACCTCCGCAAGCATCACGATTT
GGCAAAACTGGGCGTTGCCGACATCCTGCGTTTCCCCGGCGTATTGGCAAGCCAAAGGGAAAATACGGAAGAATTGGCAA
AAAGCATTACCGAACTGACCGAAAAAGCGTTAAAAGACTTTACTGCCGCACGCAAGCGGGAAGGTAAGAAATTAGGCGAG
CACCTGCTGCAACGCCTTGAGGCTATGGAAGAAATCATAGATGCATTAAGCGAACTCTTTCCTACCCTGTTGGAAACACA
TAAAGAAAAAATCCGCGCCCGCCTCGTCGAAGCGGTCGGCAGCATCGACAACGACCGCCTGCAACAGGAATTTGCCCTCT
TTATCCAAAAATCCGACATCGACGAAGAGTTCAGCCGCCTACGCACCCACATTGCCGAAGTGCGCCGTATCGTTACCGAA
CACAAAGGCAGCAGCGGCAAACGGCTGGACTTCCTGATGCAGGAATTAAACCGCGAAGCCAACACTTTGGGCAGCAAATC
CATTGCCGCCGAATGCACCCAAGCCTCGGTCGAACTGAAAGTCTTAATCGAGCAGATGCGGGAACAGGTGCAGAATATCG
AATAA

Upstream 100 bases:

>100_bases
ATCTGCCGCTGCAAAATCTTCAATTTTTCACACCCGAAAACGCTTGCCGCCATACAGATGTGATATATTGATTCCATTTT
AACGGGCTTCGGAGAACGAC

Downstream 100 bases:

>100_bases
TCGGTTTCCCCGATAAGCAAATGCCGTCTGAAAGCCCTTTCAGACGGCATTTTTTCAGGTTGAAACCTTTGCGGTATAAA
GGCTTAAGGCTTTCCTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRMPDDLRYLESGIREKISSHIARGKVECKIQIQDAENG
SQSLELNRDLVGQLAEINKDLRKHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARKREGKKLGE
HLLQRLEAMEEIIDALSELFPTLLETHKEKIRARLVEAVGSIDNDRLQQEFALFIQKSDIDEEFSRLRTHIAEVRRIVTE
HKGSSGKRLDFLMQELNREANTLGSKSIAAECTQASVELKVLIEQMREQVQNIE

Sequences:

>Translated_294_residues
MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRMPDDLRYLESGIREKISSHIARGKVECKIQIQDAENG
SQSLELNRDLVGQLAEINKDLRKHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARKREGKKLGE
HLLQRLEAMEEIIDALSELFPTLLETHKEKIRARLVEAVGSIDNDRLQQEFALFIQKSDIDEEFSRLRTHIAEVRRIVTE
HKGSSGKRLDFLMQELNREANTLGSKSIAAECTQASVELKVLIEQMREQVQNIE
>Mature_293_residues
SSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRMPDDLRYLESGIREKISSHIARGKVECKIQIQDAENGS
QSLELNRDLVGQLAEINKDLRKHHDLAKLGVADILRFPGVLASQRENTEELAKSITELTEKALKDFTAARKREGKKLGEH
LLQRLEAMEEIIDALSELFPTLLETHKEKIRARLVEAVGSIDNDRLQQEFALFIQKSDIDEEFSRLRTHIAEVRRIVTEH
KGSSGKRLDFLMQELNREANTLGSKSIAAECTQASVELKVLIEQMREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=289, Percent_Identity=40.4844290657439, Blast_Score=210, Evalue=9e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 33324; Mature: 33192

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRMPDDLRYLESGIREKIS
CCCCCEEEEEECCHHHHHHHCCCCCCCCHHEECCCEEEEEEEECCHHHHHHHHHHHHHHH
SHIARGKVECKIQIQDAENGSQSLELNRDLVGQLAEINKDLRKHHDLAKLGVADILRFPG
HHHHCCCEEEEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VLASQRENTEELAKSITELTEKALKDFTAARKREGKKLGEHLLQRLEAMEEIIDALSELF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLLETHKEKIRARLVEAVGSIDNDRLQQEFALFIQKSDIDEEFSRLRTHIAEVRRIVTE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HKGSSGKRLDFLMQELNREANTLGSKSIAAECTQASVELKVLIEQMREQVQNIE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRMPDDLRYLESGIREKIS
CCCCEEEEEECCHHHHHHHCCCCCCCCHHEECCCEEEEEEEECCHHHHHHHHHHHHHHH
SHIARGKVECKIQIQDAENGSQSLELNRDLVGQLAEINKDLRKHHDLAKLGVADILRFPG
HHHHCCCEEEEEEEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VLASQRENTEELAKSITELTEKALKDFTAARKREGKKLGEHLLQRLEAMEEIIDALSELF
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTLLETHKEKIRARLVEAVGSIDNDRLQQEFALFIQKSDIDEEFSRLRTHIAEVRRIVTE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HKGSSGKRLDFLMQELNREANTLGSKSIAAECTQASVELKVLIEQMREQVQNIE
CCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2664418; 7686882; 9278503; 1925027 [H]