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The map label for this gene is accD [H]

Identifier: 161869618

GI number: 161869618

Start: 647854

End: 648726

Strand: Direct

Name: accD [H]

Synonym: NMCC_0635

Alternate gene names: 161869618

Gene position: 647854-648726 (Clockwise)

Preceding gene: 161869617

Following gene: 161869620

Centisome position: 30.08

GC content: 54.18

Gene sequence:

>873_bases
ATGAGCTGGTTAGATAAAATCCTGCCACCCAAAATCAAAAACCGCAGCAAAGACGGTTCTTCCAATGTTCCCGAGGGTTT
GTGGCACAAATGTCCGTCTTGTTCGGCAACCGTTTATTCGACCGAGTTGCAGCAGAACAATCAGGTTTGTCCGAAATGCA
ACCACCACAATCCGTTGTCGGCACGACAACGCCTGAATCTGCTTTTGGATGAGGAAGGCAGGGAGGAAGTTGCGGGTAAT
GTCAAACCGATAGATCCTTTGAAGTTTAAAGACGGCAAAAAATATCCGGATCGTTTGAGTGCGGCACGCAAGCTGACCGG
GGAAGATGATGCTTTGGTGGTGATGAAAGGCAAGATGAACGGTCTGCCCGTCGTCGTTGCCGCGTTTGAATTCCGCTTTA
TCGGCGGTTCGATGGGTTCGGTTGTGGGCGAACGTTTCGTACAAGGTATCCGTCGGGCGGTTGCCGACAATTGTCCGTTC
GTCTGTGTGGCGGCCTCCGGCGGTGCGCGTATGCAGGAGGGTGTGAACTCATTGATGCAGATGACGAAAACCAGTGCCGC
GCTGCATTTGCTGACGGAAAAACGCCTGCCATTTATATCGGTGTTGACCGATCCGACTATGGGCGGCGTATCCGCCAGCT
TCGCATTTTTGGGCGATGTCGTGCTTGCCGAACCGAACGCGCTGATCGGTTTTGCCGGTCCGCGCGTGATTGAGCAGACG
GTGCGCGAAACGCTGCCGGAAGGCTTCCAACGCGCCGAGTTCCTGCTGGAAAAAGGCGCAATCGACCAGATTGTCGACCG
CCGCGATATGAAGCGGCGCATCAGTGATTTGATTACGCTGTTGTGCCGTCAGGACAAAGTTTCTGCCGCCTGA

Upstream 100 bases:

>100_bases
TGCGGGCAACGAGGCTGCCGCCGTCGGTGCTTTGGTCAAAGAGTTGAAGGATGCCGTGCGCTGATTCTGTCACGCATTCT
AAATATTTTAGGAGTTGTCC

Downstream 100 bases:

>100_bases
TGGCTGATGAATCGAATACCGTCTGAAACCGATGTTTCAGACGGTATTTTTGTGTCTGGTTATTTGTCGTGCGGCTTTAT
CGACGGGGCATAGCGTCCGG

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQQNNQVCPKCNHHNPLSARQRLNLLLDEEGREEVAGN
VKPIDPLKFKDGKKYPDRLSAARKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQT
VRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISDLITLLCRQDKVSAA

Sequences:

>Translated_290_residues
MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQQNNQVCPKCNHHNPLSARQRLNLLLDEEGREEVAGN
VKPIDPLKFKDGKKYPDRLSAARKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQT
VRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISDLITLLCRQDKVSAA
>Mature_289_residues
SWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQQNNQVCPKCNHHNPLSARQRLNLLLDEEGREEVAGNV
KPIDPLKFKDGKKYPDRLSAARKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPFV
CVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQTV
RETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISDLITLLCRQDKVSAA

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA [H

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family [H]

Homologues:

Organism=Escherichia coli, GI1788655, Length=281, Percent_Identity=60.1423487544484, Blast_Score=353, Evalue=8e-99,
Organism=Caenorhabditis elegans, GI25147362, Length=189, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI25147359, Length=189, Percent_Identity=26.984126984127, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762 [H]

Pfam domain/function: PF01039 Carboxyl_trans [H]

EC number: =6.4.1.2 [H]

Molecular weight: Translated: 31765; Mature: 31634

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQQNNQVCPKCNHHNPLS
CCHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCC
ARQRLNLLLDEEGREEVAGNVKPIDPLKFKDGKKYPDRLSAARKLTGEDDALVVMKGKMN
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC
GLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPFVCVAASGGARMQEGVNSLMQ
CCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
MTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQT
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHEECCCEEEECCCHHHHHHH
VRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISDLITLLCRQDKVSAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQQNNQVCPKCNHHNPLS
CHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCC
ARQRLNLLLDEEGREEVAGNVKPIDPLKFKDGKKYPDRLSAARKLTGEDDALVVMKGKMN
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCC
GLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPFVCVAASGGARMQEGVNSLMQ
CCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH
MTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLGDVVLAEPNALIGFAGPRVIEQT
HHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHEECCCEEEECCCHHHHHHH
VRETLPEGFQRAEFLLEKGAIDQIVDRRDMKRRISDLITLLCRQDKVSAA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA