Click here to switch to the map view.

The map label for this gene is ydiA [C]

Identifier: 161869552

GI number: 161869552

Start: 591842

End: 592663

Strand: Direct

Name: ydiA [C]

Synonym: NMCC_0567

Alternate gene names: 161869552

Gene position: 591842-592663 (Clockwise)

Preceding gene: 161869546

Following gene: 161869555

Centisome position: 27.48

GC content: 53.28

Gene sequence:

>822_bases
ATGAGCAGTCCGCGCCATGTGTTTTACATTTCCGACCGTACCGGTCTGACTGCCGAGAATATCGGCGAGGCTTTGCTGAA
CCAGTTTGGCAATCTGTCGTTCAAACGCCATACGCATCCGTTTGTCGATACGCCGGAAAAGGCGCGCGCGGTGGTGGAGA
AGGTCAATCGGAGCCGGCAGGAAAACGGTCAGCGTCCGATTGCGTTTGTCAGTGTGGTTGATGACGAAATCCGTCGGATT
ATCAAAGGGGCGGATGCTTTTCAGATTAATTTCTTTGAGACTTTTTTGGGACTGTTGGAGAAAGAACTCAATACCGAAGC
CACGGCATCCGAGCAGGGGCATCACAGTATCGGTAATACGAAGCGTTACGATGCGCGTATGGAGGCGGTGAATTTCTCAT
TGAACCACGATGACGGGGTCAGCGATAAGAACCTTCAGGAAGCGGATGTAATCTTGATGGGTGTATCGCGTTCGGGCAAA
ACGCCGACCTGCCTTTACCTCGCCCTGCAATACGGCATCCGTGCGGCAAACTATCCGCTGATTCCCGACGATTTGGAATC
GGCCGATCTGCCGCGTATGGTCAAGCCTTATAGGGATAAGCTGTTCGGGTTGACCATCCAGCCGGAACGTTTGCAGGCCA
TCCGCCAAGAGCGCCGCCCGAATTCAACTTATGCCAAAATCGATACATGCCGCAGCGAGGTGGCGGACGCGCAGAGTATG
TTCAGACGGCATGGGATTCCGTTTGCGAATACGACGGATAAATCAGTGGAAGAGCTTGCCGTACACATCCTTCAGGCGTG
CAAGCTCAAACGCAGGTTTTGA

Upstream 100 bases:

>100_bases
TGTTTGGGTGTAATCCGAGGTAGGTGTGCTGCGAGTGCTTTCCTTGTGTCTGCCGCTGCTGTTATGATGGGATTTTAAAC
CTGTGTTTTAAGGATGGAAG

Downstream 100 bases:

>100_bases
CGGGTTTTGATTCGGTTTGAAGGTGGAACTGCCGTCTGAAATCAGGTTTCAGACGGCAGTTTTATAGTGGATTAACAAAA
ATCAGGACAAGGCGACGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDTPEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRI
IKGADAFQINFFETFLGLLEKELNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQERRPNSTYAKIDTCRSEVADAQSM
FRRHGIPFANTTDKSVEELAVHILQACKLKRRF

Sequences:

>Translated_273_residues
MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDTPEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRI
IKGADAFQINFFETFLGLLEKELNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQERRPNSTYAKIDTCRSEVADAQSM
FRRHGIPFANTTDKSVEELAVHILQACKLKRRF
>Mature_272_residues
SSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDTPEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRII
KGADAFQINFFETFLGLLEKELNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGKT
PTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQERRPNSTYAKIDTCRSEVADAQSMF
RRHGIPFANTTDKSVEELAVHILQACKLKRRF

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=271, Percent_Identity=47.2324723247232, Blast_Score=259, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 30966; Mature: 30835

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDTPEKARAVVEKVNRSRQ
CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH
ENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKELNTEATASEQGHHSIGNT
HCCCCCEEEEHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGKTPTCLYLALQYGIRAANYPL
HHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHCCCCC
IPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQERRPNSTYAKIDTCRSEVADAQSM
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FRRHGIPFANTTDKSVEELAVHILQACKLKRRF
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDTPEKARAVVEKVNRSRQ
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHH
ENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKELNTEATASEQGHHSIGNT
HCCCCCEEEEHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
KRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGKTPTCLYLALQYGIRAANYPL
HHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHCCCCC
IPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQERRPNSTYAKIDTCRSEVADAQSM
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FRRHGIPFANTTDKSVEELAVHILQACKLKRRF
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA