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The map label for this gene is insH1 [C]

Identifier: 161869484

GI number: 161869484

Start: 519533

End: 520426

Strand: Reverse

Name: insH1 [C]

Synonym: NMCC_0497

Alternate gene names: 161869484

Gene position: 520426-519533 (Counterclockwise)

Preceding gene: 161869485

Following gene: 161869483

Centisome position: 24.17

GC content: 52.46

Gene sequence:

>894_bases
ATGATTGCCAAACACATCGACCGTTTCCCGCTATTGAAGCTAGATCAAGTGATTGATTGGCAACCGATCGAACAATACCT
GAACCGTCAAAGAATCCGTTACCTCCGAGACCACCGCGGCCGTCCCGCCTACCCCCTGCTGTCCATGTTCAAAGCCGTCC
TGCTCGGACAATGGCACAGCCTCTCCGATCCCGAACTCGAACACAGCCTCATCACCCGCATCGATTTCAACCTGTTTTGC
CGCTTTGACGAACTGAGCATCCCCGATTACAGTACTTTATGCCGTTACCGCAACTGGCTGGCGCAAGACGACACCCTGTC
CGAATTGCTGGAACTGATTAACCGCCAACTGACCGAAAAAGGTTTAAAAATAGAGAAAGCATCCGCCGCCGTCGTTGATG
CCACCATTATTCAGACCGCCGGCAGCACACAGCGTCAGGCCATAGAAGTCGATGAAGAAGGACAAATCAACGGCCAAACC
ACACCGAGTAAGGACAAAGATGCCCGTTGGATCAAGAAAAACGGCCTCTACAAACTCGGTTACAAACAACATACCCGTAC
CGATGCAGAAGGCTATATCGAGAAACTGCACATTACCCCCGCCAATGCCCATGAGTGCAACCACCTGTCGCCTTTGCTGG
AAGGGATAGCCGACGGTACGACCGTCTATGCCGACAAAGGCTATGACAGTGCGGAAAACCGGCAACATCTGAAAGAACAT
CAGTTGCAGGACGGCATTATGCGCAAAGCCTGCCGCAACCGTCCGCTGACGGAAGTGCAAACCAAACGCAACCGATATTT
GTCGAAGACCCGTTATGTGGTCGAACAAAGCTTCGGTACGCTGCACCGTAAGTTCCGCTATGCGCGGGCAGCCTATTTCG
GACTGATTAAGTGA

Upstream 100 bases:

>100_bases
GGTCGAGACCTTTGCAAAATTCCCCAAAATCCCCTAAATTCCCACCAAGCCATTTAGGGGATTTTCCATGAGCACCTTCT
TCCGGCAAACCGCACAAGCC

Downstream 100 bases:

>100_bases
GTGCGCAAAGCCATCTGAAGGCGATGTGTTTGAACCTGTTGAAAGCCGCCAACAGGCTAAGTGCGCCCGCTGCCGCCTAA
AAGGCAGCCCGGATGCCTGA

Product: IS1106 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFC
RFDELSIPDYSTLCRYRNWLAQDDTLSELLELINRQLTEKGLKIEKASAAVVDATIIQTAGSTQRQAIEVDEEGQINGQT
TPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEH
QLQDGIMRKACRNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK

Sequences:

>Translated_297_residues
MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFC
RFDELSIPDYSTLCRYRNWLAQDDTLSELLELINRQLTEKGLKIEKASAAVVDATIIQTAGSTQRQAIEVDEEGQINGQT
TPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEH
QLQDGIMRKACRNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
>Mature_297_residues
MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFC
RFDELSIPDYSTLCRYRNWLAQDDTLSELLELINRQLTEKGLKIEKASAAVVDATIIQTAGSTQRQAIEVDEEGQINGQT
TPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEH
QLQDGIMRKACRNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1788303, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI1789921, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1789612, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1789355, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1788518, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1788342, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1787592, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1786877, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1786764, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1786453, Length=296, Percent_Identity=29.0540540540541, Blast_Score=111, Evalue=7e-26,
Organism=Escherichia coli, GI1787634, Length=296, Percent_Identity=28.7162162162162, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 34571; Mature: 34571

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKAVLLGQWHS
CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
LSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINRQLTEK
CCCCHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GLKIEKASAAVVDATIIQTAGSTQRQAIEVDEEGQINGQTTPSKDKDARWIKKNGLYKLG
CCEEEHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECC
YKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEH
CHHHCCCCHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
QLQDGIMRKACRNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKAVLLGQWHS
CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
LSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINRQLTEK
CCCCHHHHHHHHHCCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GLKIEKASAAVVDATIIQTAGSTQRQAIEVDEEGQINGQTTPSKDKDARWIKKNGLYKLG
CCEEEHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCHHHHHHCCCEECC
YKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEH
CHHHCCCCHHHHHEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
QLQDGIMRKACRNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]