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The map label for this gene is insH1 [C]

Identifier: 161869483

GI number: 161869483

Start: 518428

End: 519288

Strand: Reverse

Name: insH1 [C]

Synonym: NMCC_0496

Alternate gene names: 161869483

Gene position: 519288-518428 (Counterclockwise)

Preceding gene: 161869484

Following gene: 161869482

Centisome position: 24.11

GC content: 52.61

Gene sequence:

>861_bases
TTGAAGTTGGACCAAGTGATTGATTGGCAACCAATCGAACAATACCTGAACCGTCAAAAAACCCGTTACCTTAGAGACCA
CCGCGGCCGTCCCGCCTATCCCCTGTTGTCCATGTTCAAAGCCGTCCTGCTCGGACAATGGCACAGCCTCTCCGATCCCG
AACTCGAACACAGCCTCATCACCCGCATCGATTTCAACCTGTTTTGCCGTTTTGACGAACTGAGCATCCCCGATTACAGC
ACCTTATGCCGCTACCGCAATTGGCTGGCGCAAGACGACACCCTGTCCGAACTGTTGGAACTGATTAACTGCCAACTGAC
CGAAAAAGGCTTAAAAGTAGAGAAAGCATCCGCCGCCGTCATTGACGCCACCATTATTCAGACCGCCGGCAGCAAACAGC
GTCAGGCCATAGAAGTTGACGAAGAAGGACAAGTCAGCGGCCAAACCACACCGAGTAAGGACAGCGATGCCCGTTGGATC
AAGAAAAACGGCCTCTACAAACTCGGTTACAAACAACATACACGTACCGATGCAGAAGGCTATATCGAGAAACTGCACAT
TACCCCCGCCAATGCCCATGAGTGCAACCACCTGTCGCCTTTGCTGGAAGGGATAGCCGACGGTACGACCGTCTATGCCG
ACAAAGGCTATGACAGTGCGGAAAACCGGCAACATCTGAAAGAACATCAGTTGCAGGACGGCATTATGCGCAAAGCCTGC
CGCAACCGTCCGCTGACGGAAGTGCAAACCAAACGCAACCGATATTTGTCGAAGACCCGTTATGTGGTCGAACAAAGCTT
CGGTACGCTGCACCGTAAGTTCCGCTATGCGCGGGCAGCCTATTTCGGACTGATTAAGTGA

Upstream 100 bases:

>100_bases
TAGGCGGTATTTGGGGCGGAAATAGACGAAAACCTGTGTTTGGGTTTCGGCTGTCGGGAGGGAAAGGAATTTTGCAAAGG
TCTCCGACCGTTTCCCGCTA

Downstream 100 bases:

>100_bases
GTGCGCAAAGCCATCTGAAGGCGATGTGTTTGAACCTGTTGAAAGCCGCCAACAGGCTAAGTGCGCCCGCTGCCGCCTAA
AAGGCAGCCCGGATGCCTGA

Product: IS1106 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
TLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDARWI
KKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEHQLQDGIMRKAC
RNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK

Sequences:

>Translated_286_residues
MKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
TLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDARWI
KKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEHQLQDGIMRKAC
RNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
>Mature_286_residues
MKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
TLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDARWI
KKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEHQLQDGIMRKAC
RNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1788303, Length=294, Percent_Identity=27.891156462585, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789921, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789612, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789355, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788518, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1788342, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787592, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786877, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786764, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786453, Length=294, Percent_Identity=27.891156462585, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787634, Length=294, Percent_Identity=27.5510204081633, Blast_Score=104, Evalue=8e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 33118; Mature: 33118

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAV
HHCCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCEEHHHHHHH
IDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEG
HHHHHHHHCCCCHHCEECCCCCCCCCCCCCCCCCCCCHHHHHCCCEECCCHHHCCCCHHH
YIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEHQLQDGIMRKAC
HHEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLDQVIDWQPIEQYLNRQKTRYLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLI
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
TRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLELINCQLTEKGLKVEKASAAV
HHCCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHCCCEEHHHHHHH
IDATIIQTAGSKQRQAIEVDEEGQVSGQTTPSKDSDARWIKKNGLYKLGYKQHTRTDAEG
HHHHHHHHCCCCHHCEECCCCCCCCCCCCCCCCCCCCHHHHHCCCEECCCHHHCCCCHHH
YIEKLHITPANAHECNHLSPLLEGIADGTTVYADKGYDSAENRQHLKEHQLQDGIMRKAC
HHEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
RNRPLTEVQTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]