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The map label for this gene is rbn [C]

Identifier: 161869450

GI number: 161869450

Start: 481454

End: 482569

Strand: Reverse

Name: rbn [C]

Synonym: NMCC_0461

Alternate gene names: 161869450

Gene position: 482569-481454 (Counterclockwise)

Preceding gene: 161869456

Following gene: 161869432

Centisome position: 22.41

GC content: 57.26

Gene sequence:

>1116_bases
ATGACGTTTACGACGCTGCTGGCACTCGTCCCCGTGCTGACCGTGATGGTGGCGGTCGCTTCGATTTTCCCCGTGTTCGA
CCGCTGGTCGGATTCGTTCGTCTCCTTCGTCAACCAAACCATTGTGCCGCAGGGCGCGGACATGGTGTTCGACTATATCA
ATGCGTTCCGCGAGCAGGCGAACCGGCTGACGGCAATCGGCAGCGTGATGCTGGTCGTTACCTCGCTGATGCTGATTCGG
ACGATAGACAATACGTTCAACCGCATCTGGCGGGTCAATTCCCAGCGTCCGTGGATGATGCAGTTTCTCGTCTATTGGGC
TTTACTGACGTTCGGGCCGCTGTCTTTGGGCGTGGGCATTTCCTTTATGGTCGGCTCGGTACAGGATGCCGCGCTTGCCT
CAGGTGCGCCGCAGTGGTCGGGCGCGTTGCGAACGGCGGCGACGCTGACCTTCATGACGCTTTTGCTGTGGGGGCTGTAC
CGCTTCGTGCCAAACCGCTTCGTTCCCGCGCGGCAGGCGTTTGTCGGGGCTTTGGCAACAGCGTTCTGTCTGGAAACCGC
ACGTTCCCTCTTCACTTGGTATATGGGCAACTTCGACGGCTACCGCTCGATTTACGGCGCGTTTGCCGCCGTGCCGTTTT
TTCTGTTGTGGCTGAACCTGTTGTGGACGCTGGTCTTGGGCGGCGCGGTGCTGACTTCTTCACTCTCCTACTGGCAGGGA
GAAGCGTTCCGCAGGGGCTTCGACTCGCGCGGACGGTTTGACGACGTGTTGAAAATCCTGCTGCTTCTGGATGCGGCGCA
AAAAGAAGGCAAAGCCTTGCCTGTTCAGGAGTTCAGACGGCATATCAATATGGGCTACGACGAGTTGGGCGAGCTTTTGG
AAAAGCTGGCGCGGCACGGCTACATCTATTCCGGCAGACAGGGTTGGGTGTTGAAAACGGGGGCGGATTCGATTGAGTTG
AACGAACTCTTCAAGCTCTTCGTTTACCGTCCGTTGCCTGTGGAAAGGGATCATGTGAACCAAGCTGTCGATGCGGTAAT
GATGCCGTGTTTGCAGACTTTGAACATGACGCTGGCAGAGTTTGACGCTCAGGCGAAAAAACAGCAGCAATCTTGA

Upstream 100 bases:

>100_bases
ACAACGTTTGCAAGGTTTGGCAGACAATAAAATCTGTGCGTTTGCATGGTTCGTCGTCCGCCGCTTTGATGAAGAACGCG
TACCGCAGGCGGCGGCAAGC

Downstream 100 bases:

>100_bases
GTATTTTTGAAACTGTATTTTTATCCTAAAGACATTTTCCTATCTGCTGATTCCACCGTTTCCTTTCTGTGTGCCGCCAT
AATTTTTATGATAGACAAGC

Product: ribonuclease BN/unknown domain fusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTAIGSVMLVVTSLMLIR
TIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFMVGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLY
RFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQG
EAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLARHGYIYSGRQGWVLKTGADSIEL
NELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLNMTLAEFDAQAKKQQQS

Sequences:

>Translated_371_residues
MTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTAIGSVMLVVTSLMLIR
TIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFMVGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLY
RFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQG
EAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLARHGYIYSGRQGWVLKTGADSIEL
NELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLNMTLAEFDAQAKKQQQS
>Mature_370_residues
TFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTAIGSVMLVVTSLMLIRT
IDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFMVGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYR
FVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE
AFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLARHGYIYSGRQGWVLKTGADSIELN
ELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLNMTLAEFDAQAKKQQQS

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family

Homologues:

Organism=Escherichia coli, GI1790319, Length=242, Percent_Identity=34.7107438016529, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y461_NEIM0 (A9M1Y8)

Other databases:

- EMBL:   CP000381
- RefSeq:   YP_001598617.1
- EnsemblBacteria:   EBNEIT00000012200
- GeneID:   5796451
- GenomeReviews:   CP000381_GR
- KEGG:   nmn:NMCC_0461
- GeneTree:   EBGT00050000020118
- HOGENOM:   HBG451793
- ProtClustDB:   PRK04214
- BioCyc:   NMEN374833:NMCC_0461-MONOMER
- HAMAP:   MF_00672
- InterPro:   IPR017039
- InterPro:   IPR004664
- TIGRFAMs:   TIGR00765

Pfam domain/function: PF03631 Ribonuclease_BN

EC number: 3.1.-.- [C]

Molecular weight: Translated: 41837; Mature: 41706

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x94e3104)-; HASH(0x15184b70)-; HASH(0x158053d8)-; HASH(0x154442dc)-; HASH(0x40c24ef0)-; HASH(0x156fc0b8)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFMVGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALAT
HHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AFCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLARHG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
YIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLNMTLAE
CEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FDAQAKKQQQS
HHHHHHHHCCH
>Mature Secondary Structure 
TFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
NRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SFMVGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALAT
HHHHHCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AFCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLARHG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCC
YIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLNMTLAE
CEEECCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FDAQAKKQQQS
HHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA