| Definition | Neisseria meningitidis 053442, complete genome. |
|---|---|
| Accession | NC_010120 |
| Length | 2,153,416 |
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The map label for this gene is 161869443
Identifier: 161869443
GI number: 161869443
Start: 475018
End: 476607
Strand: Direct
Name: 161869443
Synonym: NMCC_0454
Alternate gene names: NA
Gene position: 475018-476607 (Clockwise)
Preceding gene: 161869442
Following gene: 161869444
Centisome position: 22.06
GC content: 46.79
Gene sequence:
>1590_bases ATGCGTAAGGTGTGTGCTTCAGCACGCACGCGTTCCATGATTTACGGCTCAATGCCGTCTGAAAAGCTCACAATTTTTCA GACGGCATTTGTTATGCAAGTAAATATTCAGATTCCCTATATACTGCCCAGATGCGTGCGTGCTGAAGACACCCCCTACG CTTGCTATTTGAAACAGCTCCAAGTCACCAAAGACGTCAACTGGAACCAGGTACAACTGGCGTACGACAAATGGGACTAT AAACAGGAAGGCTTAACCGGAGCCGGAGCAGCGATTATTGCGCTGGCTGTTACCGTGGTTACTGCGGGCACGGGAGCCGG AGCCGCACTGGGCTTAAACGGCGCGGCCGCAGCGGCAACCGATGCCGCATTCGCCTCGCTGGCCAGCCAGGCTTCCGTAT CGCTCATCAACAACAAAGGCAATATCGGTAACACCCTGAAAGAGCTGGGCAGAAGCAGCACGGTGAAAAATCTGGTGGTT GCCGCCGCTACCGCAGGCGTAGCCGACAAAATCGGCGCTTCGGCACTGAACAATGTCAGCGATAAGCAGTGGATCAACAA CCTGACCGTCAACCTGGCCAATGCGGGCAGTGCCGCACTGATTAATACCGCTGTCAACGGCGGCAGCCTGAAAGACAATC TGGAAGCGAATATCCTTGCGGCTTTGGTCAATACCGCGCATGGAGAAGCAGCCAGTAAAATCAAACAGTTGGATCAGCAC TACATAGTCCACAAGATTGCCCATGCCATAGCGGGCTGTGCGGCAGCGGCGGCGAATAAGGGCAAGTGTCAAGATGGTGC GATCGGTGCGGCGGTCGGTGAAATCCTTGGCGAAACCCTACTGGACGGCAGAGACCCTGGCAGCCTGAATGTGAAGGACA GGGCAAAAATCATTGCTAAGGCGAAGCTGGCAGCAGGGGCGGTTGCGGCGTTGAGTAAGGGGGATGTGAGTACGGCGGCG AATGCGGCTGCTGTGGCGGTAGAGAATAATTCTTTAAATGATATACAGGATCGTTTGTTGAGTGGAAATTATGCTTTATG TATGAGTGCAGGAGGAGCAGAAAGCTTTTGTGAGTCTTATCGACCACTGGGCTTGCCACACTTTGTAAGTGTTTCAGGAG AAATGAAATTACCTAATAAATTCGGGAATCGTATGGTTAATGGAAAATTAATTATTAACACTAGAAATGGCAATGTATAT TTCTCTGTAGGTAAAATATGGAGTACTGTAAAATCAACAAAATCAAATATAAGTGGGGTATCTGTCGGTTGGGTTTTAAA TGTTTCCCCTAATGATTATTTAAAAGAAGCATCTATGAATGATTTCAGAAATAGTAATCAAAATAAAGCCTATGCAGAAA TGATTTCCCAGACTTTGGTAGGTGAGAGTGTTGGTGGTAGTCTTTGTCTGACAAGAGCCTGCTTTTCGGTAAGTTCAACA ATATCTAAATCTAAATCTCCTTTTAAAGATTCAAAAATTATTGGGGAAATCGGTTTGGGAAGTGGTGTTGCTGCAGGAGT AGAAAAAACAATATACATAGGTAACATAAAAGATATTGATAAATTTATTAGTGCAAACATAAAAAAATAG
Upstream 100 bases:
>100_bases ATGATTAGACTGTTGAGAGGTGAAAGTAAAACAACAGACTTTCAATGGCCGCAATTTGATGAATAGCAGCAAGCTGTAGC CTGCATGAAACCTAAAATCC
Downstream 100 bases:
>100_bases GAGTTAGTATGAAATATATGATTAATTTTCTAAAAAAAACATTTGAATTAATGAGTTGGGTATTAGTCATACTAATAATT GGGACATTTTATGACTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MRKVCASARTRSMIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACYLKQLQVTKDVNWNQVQLAYDKWDY KQEGLTGAGAAIIALAVTVVTAGTGAGAALGLNGAAAAATDAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLVV AAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQH YIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEILGETLLDGRDPGSLNVKDRAKIIAKAKLAAGAVAALSKGDVSTAA NAAAVAVENNSLNDIQDRLLSGNYALCMSAGGAESFCESYRPLGLPHFVSVSGEMKLPNKFGNRMVNGKLIINTRNGNVY FSVGKIWSTVKSTKSNISGVSVGWVLNVSPNDYLKEASMNDFRNSNQNKAYAEMISQTLVGESVGGSLCLTRACFSVSST ISKSKSPFKDSKIIGEIGLGSGVAAGVEKTIYIGNIKDIDKFISANIKK
Sequences:
>Translated_529_residues MRKVCASARTRSMIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACYLKQLQVTKDVNWNQVQLAYDKWDY KQEGLTGAGAAIIALAVTVVTAGTGAGAALGLNGAAAAATDAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLVV AAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQH YIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEILGETLLDGRDPGSLNVKDRAKIIAKAKLAAGAVAALSKGDVSTAA NAAAVAVENNSLNDIQDRLLSGNYALCMSAGGAESFCESYRPLGLPHFVSVSGEMKLPNKFGNRMVNGKLIINTRNGNVY FSVGKIWSTVKSTKSNISGVSVGWVLNVSPNDYLKEASMNDFRNSNQNKAYAEMISQTLVGESVGGSLCLTRACFSVSST ISKSKSPFKDSKIIGEIGLGSGVAAGVEKTIYIGNIKDIDKFISANIKK >Mature_529_residues MRKVCASARTRSMIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACYLKQLQVTKDVNWNQVQLAYDKWDY KQEGLTGAGAAIIALAVTVVTAGTGAGAALGLNGAAAAATDAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLVV AAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQH YIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEILGETLLDGRDPGSLNVKDRAKIIAKAKLAAGAVAALSKGDVSTAA NAAAVAVENNSLNDIQDRLLSGNYALCMSAGGAESFCESYRPLGLPHFVSVSGEMKLPNKFGNRMVNGKLIINTRNGNVY FSVGKIWSTVKSTKSNISGVSVGWVLNVSPNDYLKEASMNDFRNSNQNKAYAEMISQTLVGESVGGSLCLTRACFSVSST ISKSKSPFKDSKIIGEIGLGSGVAAGVEKTIYIGNIKDIDKFISANIKK
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55028; Mature: 55028
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVCASARTRSMIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACYLKQL CCCHHHHHHHHHEEECCCCCCCEEEEEEEEEEEEEEEECCCCHHHHCCCCCCHHHHHHHH QVTKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVTVVTAGTGAGAALGLNGAAAAAT HHHCCCCCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH DAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVS HHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCH DKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQH HHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH YIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEILGETLLDGRDPGSLNVKDRAKIIAK HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AKLAAGAVAALSKGDVSTAANAAAVAVENNSLNDIQDRLLSGNYALCMSAGGAESFCESY HHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEECCCHHHHHHCC RPLGLPHFVSVSGEMKLPNKFGNRMVNGKLIINTRNGNVYFSVGKIWSTVKSTKSNISGV CCCCCCEEEECCCCEECCHHHCCEEECCEEEEEECCCEEEEEHHHHHHHHHHHHCCCCCE SVGWVLNVSPNDYLKEASMNDFRNSNQNKAYAEMISQTLVGESVGGSLCLTRACFSVSST EEEEEEECCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ISKSKSPFKDSKIIGEIGLGSGVAAGVEKTIYIGNIKDIDKFISANIKK HHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCC >Mature Secondary Structure MRKVCASARTRSMIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACYLKQL CCCHHHHHHHHHEEECCCCCCCEEEEEEEEEEEEEEEECCCCHHHHCCCCCCHHHHHHHH QVTKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVTVVTAGTGAGAALGLNGAAAAAT HHHCCCCCCEEEEEECCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHH DAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVS HHHHHHHHHHHHEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCH DKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQH HHHHHCCEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH YIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEILGETLLDGRDPGSLNVKDRAKIIAK HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH AKLAAGAVAALSKGDVSTAANAAAVAVENNSLNDIQDRLLSGNYALCMSAGGAESFCESY HHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEEEECCCHHHHHHCC RPLGLPHFVSVSGEMKLPNKFGNRMVNGKLIINTRNGNVYFSVGKIWSTVKSTKSNISGV CCCCCCEEEECCCCEECCHHHCCEEECCEEEEEECCCEEEEEHHHHHHHHHHHHCCCCCE SVGWVLNVSPNDYLKEASMNDFRNSNQNKAYAEMISQTLVGESVGGSLCLTRACFSVSST EEEEEEECCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ISKSKSPFKDSKIIGEIGLGSGVAAGVEKTIYIGNIKDIDKFISANIKK HHHCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA