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The map label for this gene is pilO

Identifier: 161869410

GI number: 161869410

Start: 432393

End: 433040

Strand: Reverse

Name: pilO

Synonym: NMCC_0418

Alternate gene names: NA

Gene position: 433040-432393 (Counterclockwise)

Preceding gene: 161869411

Following gene: 161869409

Centisome position: 20.11

GC content: 51.08

Gene sequence:

>648_bases
ATGGCTTCTAAATCATCTAAAACCAACTTGGATCTCAACAACCTTCACCTGCTCAACCTTCCTGCCAGGCTTTTTATCGC
CCTGCTGGCCGTTGCCGCCGTGCTGGGGCTCGGTTATGCCGGATTGTTCAAAAGCCAGATGGAATCCCTTGAGGAATACG
AAGCAAAAGAAACCGAACTGAAAAACACCTACAAACAGAAAAGTATCGACGCGGCCAGCCTGAACAACCTGAGGGACGAA
CTTGCCTCAATCCGCTCTGCCTTCGATATCATGTTGAAACAGCTGCCGACAGATGCAGAAATTCCCAACCTGGTTCAAGA
GCTTCATCAGGCAGGTTCGAGCAACGGCCTGCGCTTGGACAGCGTTATGCCCCAACCTCCCGTAGATGACGGCCCCATCA
AAAGATTACCCTATTCCATTTCCATTACCGGAAATTACGAACAGATCAGCCAATTTACCCGCGATGTCGGCAGCCTCTCC
CGAATCATTACCCTTGAGTCGCTGAAAATCGCCCAATCTCCGGAAAACGGCGGCAATCCTGACGGCAAGAGCAGCATCCT
GAACCTCAGTGCCATTGCCACCACCTACCAAGCAAAATCCGTAGAAGAGCTTGCCGCAGAAGCGGCACAAAATGCCGAGC
AAAAATAA

Upstream 100 bases:

>100_bases
GCATCAAGAATTTACCCTTCAGGCAACATTACAACCCATCGTAAAGGCGGCCGAATCCAAAGAGAATCCGGCTTCGGGAA
ACGCACAGGAGGCAAACTGA

Downstream 100 bases:

>100_bases
CTTACGTTAGGGAAACCATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAGGTTCTGAG
GACCTAAACGAATGGATGGC

Product: type IV pilus assembly protein PilO

Products: NA

Alternate protein names: Type 4 Fimbrial Biogenesis Protein PilO; Type IV Pilus Biogenesis Protein PilO; Fimbrial Assembly Membrane Protein; Tfp Pilus Assembly Protein PilO; Pilus Assembly Protein; Type IV Pilus Assembly Protein PilO; Fimbrial Type-4 Assembly Transmembrane Protein; Fimbrial Type-4 Assembly Membrane Transmembrane Protein; Type IV Pilus Assembly Membrane Transmembrane Protein; Pilus Assembly Protein Pilo; PilO Type IV Pilus Assembly Protein; Fimbrial Type-IV Assembly Protein PilO; Fimbrial Assembly Protein; Pilus Iv Assembly Membrane Protein Pilo; Type 4 Fimbrial Biogenesis Protein

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFKSQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDE
LASIRSAFDIMLKQLPTDAEIPNLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK

Sequences:

>Translated_215_residues
MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFKSQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDE
LASIRSAFDIMLKQLPTDAEIPNLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK
>Mature_214_residues
ASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFKSQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDEL
ASIRSAFDIMLKQLPTDAEIPNLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLSR
IITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK

Specific function: Unknown

COG id: COG3167

COG function: function code NU; Tfp pilus assembly protein PilO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23316; Mature: 23184

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFKSQMESLEEYEAKETEL
CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIPNLVQELHQAGSSNGLRLD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEC
SVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLSRIITLESLKIAQSPENGGNP
CCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFKSQMESLEEYEAKETEL
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
KNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIPNLVQELHQAGSSNGLRLD
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEC
SVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLSRIITLESLKIAQSPENGGNP
CCCCCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA