Click here to switch to the map view.

The map label for this gene is 161869218

Identifier: 161869218

GI number: 161869218

Start: 230612

End: 231043

Strand: Direct

Name: 161869218

Synonym: NMCC_0222

Alternate gene names: NA

Gene position: 230612-231043 (Clockwise)

Preceding gene: 161869217

Following gene: 161869219

Centisome position: 10.71

GC content: 56.71

Gene sequence:

>432_bases
ATGACCGAAAACGCACAGGACAAGGCGCGGCAGGCTGTCGAAACCGTCGTCAAATCCCCGGAGCTTGTCGAGCAAATCCT
GTCCGACGAGTACGTGCAAATAATGATAGCTCGGCGTTTCCATTCGGGACCGTTGCCGCCGCCGTCCGACTTGGCGCAAT
ACAACGACATTATCAGCAACGGGGCAGACCGCATTATGGCAATGGCGGAAAAAGAACAAGCCGTCCGGCACGAAACCATA
CGGCAAGACCAAACCTTCAACAGGCGCGGGCAACTGTACGGCTTCATCAGCGTCATCCTGATACTGCTTTTTGCCGTCTT
CCTCGTATGGAGCGGCTACCCCGCAACCGCCGCCTCCCTTGCCGGCGGCACAGTGGTTGCCTTGGCGGGTGCTTTCGTGA
TTGGAAGAAGCCGAGACCAAGGCAAAAATTAA

Upstream 100 bases:

>100_bases
GCCTGTTCCATCCCGCAAAAATCGCCATCCGCCCCAATCCCGCCGACGATCTCAAAAACATCGGCGGCGATTTTCAACGC
GCCATAGAGAAAGCGCGCAA

Downstream 100 bases:

>100_bases
TGACAAATCCTAGGGCGTGCTTCATATCCGCCCGAACGCCGAACCGCACATATAGGCACATCCCGCGCGCCGCCCGGAAG
CGGAAGCCGCGCCCTCCCAA

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGPLPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETI
RQDQTFNRRGQLYGFISVILILLFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN

Sequences:

>Translated_143_residues
MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGPLPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETI
RQDQTFNRRGQLYGFISVILILLFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN
>Mature_142_residues
TENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGPLPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIR
QDQTFNRRGQLYGFISVILILLFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN

Specific function: Unknown

COG id: COG5346

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15735; Mature: 15604

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGPLPPPSDLAQYNDIISN
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
GADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILILLFAVFLVWSGYPATAASL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AGGTVVALAGAFVIGRSRDQGKN
CCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGPLPPPSDLAQYNDIISN
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHC
GADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILILLFAVFLVWSGYPATAASL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AGGTVVALAGAFVIGRSRDQGKN
CCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA