Click here to switch to the map view.

The map label for this gene is yohJ [C]

Identifier: 161869198

GI number: 161869198

Start: 203390

End: 203734

Strand: Reverse

Name: yohJ [C]

Synonym: NMCC_0201

Alternate gene names: 161869198

Gene position: 203734-203390 (Counterclockwise)

Preceding gene: 161869199

Following gene: 161869197

Centisome position: 9.46

GC content: 57.1

Gene sequence:

>345_bases
ATGAACATCATCCGCGCGCTCCTCATCATCCTCGGCTGCCTCGCCGCCGGCGAAACCGCCGTTTTCCTAGCAGGCATCAA
ACTGCCCGGCAGCATCGTCGGCATGGGCGTGCTGTTTGCGCTTTTGCAGGCAGGTTGGGTCAAAACGTCTTGGCTACAAC
AGCTTACCGACGCGCTGATGGCGAATCTGACGCTGTTTCTCGTGCCGCCCTGCGTGGCGGTCATCAGCTATTTGGATTTG
ATTGCCGACGATTGGTTTTCGATACTGGTTTCCGCCTCCGCCAGCACTTTGTGCGTACTGCTGGTTACAGGCAAGGTTCA
CCGCTGGATACGGAGCATTATCTGA

Upstream 100 bases:

>100_bases
CGTTTGTGCGCGGCTTCGGCTTTTCAGACGGCATATTTGACGTTATGATTAAACAGTTAACAAGATTTATCACAACGCCG
TCAAAAGACAGACACACAAC

Downstream 100 bases:

>100_bases
TGAACGAAATCCTCAGGCAGCCCAGCGTTCTGCTTTTCCTCACGCTTGCCGTGTACGCGCTTGCGATTATCGTGCGCACG
CGCACGGGCAATATCTTCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQAGWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDL
IADDWFSILVSASASTLCVLLVTGKVHRWIRSII

Sequences:

>Translated_114_residues
MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQAGWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDL
IADDWFSILVSASASTLCVLLVTGKVHRWIRSII
>Mature_114_residues
MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQAGWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDL
IADDWFSILVSASASTLCVLLVTGKVHRWIRSII

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 12210; Mature: 12210

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQAGWVKTSWLQQLTDALM
CHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLVTGKVHRWIRSII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQAGWVKTSWLQQLTDALM
CHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
ANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLVTGKVHRWIRSII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA