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The map label for this gene is yohK [H]

Identifier: 161869197

GI number: 161869197

Start: 202698

End: 203390

Strand: Reverse

Name: yohK [H]

Synonym: NMCC_0200

Alternate gene names: 161869197

Gene position: 203390-202698 (Counterclockwise)

Preceding gene: 161869198

Following gene: 161869196

Centisome position: 9.44

GC content: 58.01

Gene sequence:

>693_bases
ATGAACGAAATCCTCAGGCAGCCCAGCGTTCTGCTTTTCCTCACGCTTGCCGTGTACGCGCTTGCGATTATCGTGCGCAC
GCGCACGGGCAATATCTTCTGCAACCCCGTACTCGTCAGCACTATCGTGCTGATTGCCTACCTGAAAATCCTCGACATCG
ATTATGCGGTGTACCACAACGCCGCGCAATTCATTGATTTTTGGCTGAAACCCGCCGTCGTCGTGCTTGCCGTGCCGCTC
TACCAAAACCGCCGTAAAATCTTCAACCAGTGGCTGCCCGTCATCGTTTCACAGCTTGCGGGCAGCGTTACGGGCATTGT
TACGGGGATGTATTTTGCCAAATGGCTGGGCGCGGAACGCGAAGTCGTCCTCTCGCTCGCGTCCAAATCTGTTACCAACC
CCATCGCCATTGAAATCACCCGCTCCATCGGCGGCATTCCCGCCATTACCGCCGCCACCGTCATCATTGCCGGTCTGGTC
GGACAGATTGCCGGTTACAAAATGCTGAAGAACACAGTCGTCATGCCCTCGTCCGTGGGTATGTCGCTCGGCACGGCTTC
GCACGCGATGGGGATTGCCGCCTCGCTCGAACGCAGCCGCCGCATGGCGGCATACGCGGGACTGGGGCTGACGTTCAACG
GCGTACTGACCGCGCTGATTGCGCCGCTGCTTATCCCCGTTTTGGGATTTTGA

Upstream 100 bases:

>100_bases
CCGACGATTGGTTTTCGATACTGGTTTCCGCCTCCGCCAGCACTTTGTGCGTACTGCTGGTTACAGGCAAGGTTCACCGC
TGGATACGGAGCATTATCTG

Downstream 100 bases:

>100_bases
ACCCGTTTCAGACGGCATTTCAGCCCATGCTGTCTGAACGCCGACACACTCGCAAGGAGAACCGTTATGGCTGTCAACCT
GACTGAAAAAACCGCCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVLIAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPL
YQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTALIAPLLIPVLGF

Sequences:

>Translated_230_residues
MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVLIAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPL
YQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTALIAPLLIPVLGF
>Mature_230_residues
MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVLIAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPL
YQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTALIAPLLIPVLGF

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=216, Percent_Identity=38.4259259259259, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24643; Mature: 24643

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVLIAYLKILDIDYAVYHN
CCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHH
AAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLVGQIAGYKMLKNTVVMPSSVG
HHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTALIAPLLIPVLGF
CHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVLIAYLKILDIDYAVYHN
CCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHH
AAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGSVTGIVTGMYFAKWLGAER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLVGQIAGYKMLKNTVVMPSSVG
HHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
MSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTALIAPLLIPVLGF
CHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 2575702 [H]