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The map label for this gene is yccA [C]

Identifier: 161869182

GI number: 161869182

Start: 180264

End: 180947

Strand: Direct

Name: yccA [C]

Synonym: NMCC_0179

Alternate gene names: 161869182

Gene position: 180264-180947 (Clockwise)

Preceding gene: 161869181

Following gene: 161869183

Centisome position: 8.37

GC content: 54.68

Gene sequence:

>684_bases
ATGCAACACGACGTTTACGACTACACCGCGCATACGGTTTCTAAAAACACCGTCCTGCAGAAAACCTACCGCCTGCTCGG
ATTTTCATTCATTCCGGCTGCCGCAGGCGCGGCACTTGCCGCCAATGCCGGTTTCAATTTTTACGCCGCCTTCGGTTCGC
GCTGGATAGGGTTTGCCGTCGTGTTGGCGTTTTTCTACGGTATGATCCACTTCATCGAGAAAAACCGTTACAGCAATACC
GGCGTTACCCTGCTGATGGTATTCACATTCGGTATGGGCGTATTGATCGGCCCCGTGCTGCAATACGCGCTCCATATTGC
CGACGGTGCGAAAATCGTCGGCATTGCCGCCGCGATGACCGCCGCCGTCTTTTTAACGATGTCCGCCTTGGCGCGCCGAA
CCCGGCTCGATATGAACGCGCTCGGACGCTTCCTGACCGTAGGTGCGGTCATTCTGATGGTCGCCGTGGTTGCCAATCTG
TTTTTGGGTATTCCCGCACTCGCCCTGACCATTTCCGCCGGTTTTGTCTTGTTCAGTTCCTTAATGATTATGTGGCAGGT
ACGCACCGTCATCGACGGCGGCGAAGACAGCCACATCAGCGCGGCACTGACACTGTTTATCTCGCTTTACAACATCTTCA
GCAGCCTGCTGAACATCCTGTTGTCTTTAAACGGCGAGGATTGA

Upstream 100 bases:

>100_bases
ACGCCGGACAACTTTATCTTCACGCAACCGGACAAATTTTGACATTGGGCAATGTTAAAATCCCCCATTATTCCCAACCG
CGCTTTCAGGAGCAGATGAT

Downstream 100 bases:

>100_bases
TGCCGGTAAAACGCCGTCCGACTATGCCGTCTGAAAATGCTTCAGACGGCATTTTACTTTGGGCATACAATACGGATGCA
CACGCACCAACACACAGCCG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAGFNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNT
GVTLLMVFTFGMGVLIGPVLQYALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLNILLSLNGED

Sequences:

>Translated_227_residues
MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAGFNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNT
GVTLLMVFTFGMGVLIGPVLQYALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLNILLSLNGED
>Mature_227_residues
MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAGFNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNT
GVTLLMVFTFGMGVLIGPVLQYALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLNILLSLNGED

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787205, Length=212, Percent_Identity=37.2641509433962, Blast_Score=109, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24438; Mature: 24438

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAGFNFYAAFGSRWIGFAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQYALHIADGAKIVGIAAAMT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANLFLGIPALALTISAGFVLFSS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLNILLSLNGED
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAGFNFYAAFGSRWIGFAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
VLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQYALHIADGAKIVGIAAAMT
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANLFLGIPALALTISAGFVLFSS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLNILLSLNGED
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]