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The map label for this gene is ctrB

Identifier: 161869091

GI number: 161869091

Start: 78283

End: 79446

Strand: Direct

Name: ctrB

Synonym: NMCC_0080

Alternate gene names: 161869091

Gene position: 78283-79446 (Clockwise)

Preceding gene: 161869090

Following gene: 161869092

Centisome position: 3.64

GC content: 47.08

Gene sequence:

>1164_bases
ATGTCTGAGCAACTTCCTGTGGCAGTTGCCACTGAAACCAAAGCCGAGCGTAAAAAGCCGAAAAAGAAAAGTTGGATTAA
AAAGCTAAGCCCTTTATTTTGGGTAACGGTGATTATCCCTACGGTAATTTCGTTGGTGTATTTCGGCTTCTTCGCTTCCG
ATCGTTTTACGTCGCAATCGAGCTTTGTGGTGCGCTCGCCTAAAAGCCAATCTTCTCTCAATGGCCTGGGTGCCATTTTG
CAGGGCACAGGTTTTGCCCGTGCGCAAGATGATATTTACACGGTTGGGGAGTATATGCGTTCGCGCTCGTCTTTGGATGA
ACTGCGTAAAATCTTGCCGGTGCGTGAGTTTTATGAAACCAAAGGTGATGCGTTCAGCCGCTTTAATGGGTTTGGGTTCC
GTGGCGAGGAAGAGGCTTTTTATCAATACTATAAAAATCAGGTGATGATCAATTTTGATACGGTTTCGGGTATTTCCACG
TTGAATGTAACTTCCTTTGATGCGCTGGAATCTAAGAAAATCAATGAGGCTTTGTTAAAACAAGGTGAAGCATTGATTAA
CCAGTTGAACGATCGTGCACGTGCTGATACGGTGCGCTATGCGGAAGAAGTAGTGAAAACGGCGGCAGAGCGGGTAAAGG
AAGCCTCTCAGAATCTGACGGATTACCGGATTGCCAATGGCGTTTTTGATTTGAAAGCGCAATCGGAAGTGCAAATGGGG
TTGGTTTCCAAGCTGCAAGATGAATTGATTGTGATTCAAACCCAGCTGGATCAGGTGAAAGCAGTCACTCCGGAGAATCC
GCAGATTCCGGGTTTGCAGGCGCGTGAGCAGAGCTTGCGTAAAGAAATTGACCAACAGTTACGTGCCATTTCGGGCGGTG
GGCATTCTTCGTTGTCTAATCAGGCTGCCGAGTATCAGCGTGTGTATTTGGAAAACCAGTTGGCAGAGCAGCAGTTGGCA
GCCGCCATGACTTCTTTGGAAAGTGCCAAGGTTGAAGCAGACCGTCAGCAGCTTTATTTGGAAGTGATCTCGCAACCGAG
CCTGCCGGATTTGGCACATGAGCCTAAACGGTTATACAACATTGTTGCCACTCTGATTATCGGCTTGATGGTTTATGGTA
TTTTGAGCCTGTTGACTGCCAGCATTCGTGAGCATAAAAACTGA

Upstream 100 bases:

>100_bases
CGTTGGCTGAAGTGCAGAAATTCTTGTCGTTTGTGTTCTCGCCGGTTACCAGTGGCGCGAACAGTATTAATAATTTAACT
AATTAATGTGAGTAATTAAG

Downstream 100 bases:

>100_bases
TGAAAGCCTTGCATAAAACATCATTTTGGGAATCTTTAGCCATTCAAAGGCGCGTAATCGGTGCGCTGTTGATGCGGGAA
ATTATCACCCGTTACGGTCG

Product: capsule polysaccharide export inner-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVISLVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAIL
QGTGFARAQDDIYTVGEYMRSRSSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQNLTDYRIANGVFDLKAQSEVQMG
LVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQAREQSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLA
AAMTSLESAKVEADRQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN

Sequences:

>Translated_387_residues
MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVISLVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAIL
QGTGFARAQDDIYTVGEYMRSRSSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQNLTDYRIANGVFDLKAQSEVQMG
LVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQAREQSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLA
AAMTSLESAKVEADRQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN
>Mature_386_residues
SEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVISLVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQ
GTGFARAQDDIYTVGEYMRSRSSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGISTL
NVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQNLTDYRIANGVFDLKAQSEVQMGL
VSKLQDELIVIQTQLDQVKAVTPENPQIPGLQAREQSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAA
AMTSLESAKVEADRQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the CtrC and CtrD proteins

COG id: COG3524

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexC/CtrB/KpsE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CTRB_NEIMB (P32014)

Other databases:

- EMBL:   M57677
- EMBL:   AE002098
- PIR:   S15221
- RefSeq:   NP_273136.1
- EnsemblBacteria:   EBNEIT00000009245
- GeneID:   902178
- GenomeReviews:   AE002098_GR
- KEGG:   nme:NMB0072
- TIGR:   NMB0072
- GeneTree:   EBGT00050000021976
- HOGENOM:   HBG655419
- OMA:   PRRIYNI
- ProtClustDB:   CLSK870240
- BioCyc:   NMEN122586:NMB_0072-MONOMER
- InterPro:   IPR005705
- TIGRFAMs:   TIGR01010

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43393; Mature: 43262

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12a35bf4)-; HASH(0x14af80dc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVISLVYFGFFASDRFTSQS
CCCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSRSSLDELRKILPVREFYET
CEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGISTLNVTSFDALESKKINEALLK
CCHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHH
QGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQNLTDYRIANGVFDLKAQSEVQMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEECCCCHHHHHHH
LVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQAREQSLRKEIDQQLRAISGGGHSSLSN
HHHHHHHHHEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QAAEYQRVYLENQLAEQQLAAAMTSLESAKVEADRQQLYLEVISQPSLPDLAHEPKRLYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHH
IVATLIIGLMVYGILSLLTASIREHKN
HHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVISLVYFGFFASDRFTSQS
CCCCCEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
SFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSRSSLDELRKILPVREFYET
CEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGISTLNVTSFDALESKKINEALLK
CCHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCEECCCHHHHHHHHHHHHHHHH
QGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQNLTDYRIANGVFDLKAQSEVQMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEECCCCHHHHHHH
LVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQAREQSLRKEIDQQLRAISGGGHSSLSN
HHHHHHHHHEEEEHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
QAAEYQRVYLENQLAEQQLAAAMTSLESAKVEADRQQLYLEVISQPSLPDLAHEPKRLYN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHH
IVATLIIGLMVYGILSLLTASIREHKN
HHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1659649; 10710307