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The map label for this gene is ctrA [H]

Identifier: 161869090

GI number: 161869090

Start: 77093

End: 78268

Strand: Direct

Name: ctrA [H]

Synonym: NMCC_0079

Alternate gene names: 161869090

Gene position: 77093-78268 (Clockwise)

Preceding gene: 161869084

Following gene: 161869091

Centisome position: 3.58

GC content: 46.85

Gene sequence:

>1176_bases
GTGTTTAAAGTGAAATTTTATATTCGTCACGCAGTATTATTATGGTGTGGAAGTTTAATTGTAGGATGCTCTGCGATTCC
TTCATCAGGCCCCAGCGCAAAAAAAATTGTCTCTTTAGGGCAACAATCTGAAGTTCAAATTCCTGAAGTGGAGCTGATTG
ATGTGAATCATACGGTTGCTCAGTTATTATATAAGGCTCAGATAAATCAGTCATTCACTCAGTTTGGCGATGGTTATGCT
TCGGCTGGTACGCTAAATATTGGTGATGTATTGGATATTATGATTTGGGAAGCGCCGCCGGCAGTATTGTTTGGTGGTGG
CCTTTCTTCGATGGGCTCGGGTAGTGCGCATCAAACTAAGTTGCCAGAGCAGTTGGTCACGGCACGTGGTACGGTTTCTG
TGCCGTTTGTTGGCGATATTTCGGTGGTCGGTAAAACGCCTGGTCAGGTTCAGGAAATTATTAAAGGCCGCCTGAAAAAA
ATGGCCAATCAGCCACAAGTGATGGTGCGTTTGGTGCAGAATAATGCGGCGAATGTGTCGGTGATTCGTGCTGGGAATAG
TGTGCGTATGCCGCTGACGGCAGCCGGTGAGCGTGTGTTGGATGCGGTGGCTGCGGTAGGTGGTTCAACGGCAAATGTGC
AGGATACGAATGTGCAGCTGACACGTGGCAATGTAGTACGAACTGTTGCCTTGGAAGATTTAGTTGCAAATCCGCGACAA
AATATTTTGCTGCGTCGCGGTGATGTGGTTACCATGATTACCAATCCCTATACCTTTACGTCTATGGGTGCGGTGGGGAG
AACACAAGAAATCGGTTTTTCAGCCAGAGGCTTATCGCTTTCTGAAGCCATTGGCCGTATGGGCGGTTTGCAAGATCGCC
GTTCTGATGCGCGTGGTGTGTTTGTGTTCCGCTATACGCCATTGGTGGAATTGCCGGCAGAACGTCAGGATAAATGGATT
GCTCAAGGTTATGGCAGTGAGGCAGAGATTCCAACGGTATATCGTGTGAATATGGCTGATGCGCATTCGCTATTTTCTAT
GCAGCGCTTTCCTGTGAAGAATAAAGATGTATTGTATGTGTCGAATGCGCCGTTGGCTGAAGTGCAGAAATTCTTGTCGT
TTGTGTTCTCGCCGGTTACCAGTGGCGCGAACAGTATTAATAATTTAACTAATTAA

Upstream 100 bases:

>100_bases
AATACTAGGGCGTGTCCCTAATTATACTCTACGTACTCATAAATTTATTTCGATTAAGTGCTATAATTAGGCCATTTATA
ATTATATTAGGATTTGGCTT

Downstream 100 bases:

>100_bases
TGTGAGTAATTAAGATGTCTGAGCAACTTCCTGTGGCAGTTGCCACTGAAACCAAAGCCGAGCGTAAAAAGCCGAAAAAG
AAAAGTTGGATTAAAAAGCT

Product: capsule polysaccharide export outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MFKVKFYIRHAVLLWCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYA
SAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWI
AQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN

Sequences:

>Translated_391_residues
MFKVKFYIRHAVLLWCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYA
SAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWI
AQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN
>Mature_391_residues
MFKVKFYIRHAVLLWCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYA
SAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWI
AQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN

Specific function: Involved in transport of capsular polysaccharides to the cell surface. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=306, Percent_Identity=29.4117647058824, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1788376, Length=389, Percent_Identity=27.7634961439589, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 42023; Mature: 42023

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKVKFYIRHAVLLWCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
CEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCHHHH
QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEECCCCCEEECCCCCCCCCCCCHHHC
LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
CHHHHHHCCCCEECCEECCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEE
VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
EEECCCCEECCHHHHHHHHHHHHHHCCCCCCCEECCEEEEECCCEEEEEEHHHHHCCCCH
NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
HEEEECCCEEEEEECCEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEE
FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
EEEEECCCEECCCCCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEE
SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
CCCCHHHHHHHHHHHHHHHHCCHHHHHCCCC
>Mature Secondary Structure
MFKVKFYIRHAVLLWCGSLIVGCSAIPSSGPSAKKIVSLGQQSEVQIPEVELIDVNHTVA
CEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCHHHH
QLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAVLFGGGLSSMGSGSAHQTK
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEECCCCCEEECCCCCCCCCCCCHHHC
LPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKKMANQPQVMVRLVQNNAANVS
CHHHHHHCCCCEECCEECCEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEE
VIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNVQLTRGNVVRTVALEDLVANPRQ
EEECCCCEECCHHHHHHHHHHHHHHCCCCCCCEECCEEEEECCCEEEEEEHHHHHCCCCH
NILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSARGLSLSEAIGRMGGLQDRRSDARGV
HEEEECCCEEEEEECCEEEECCCCCCCCHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCEE
FVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVYRVNMADAHSLFSMQRFPVKNKDVLYV
EEEEECCCEECCCCCCCCHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEE
SNAPLAEVQKFLSFVFSPVTSGANSINNLTN
CCCCHHHHHHHHHHHHHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1659649; 1371768; 10710307 [H]