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The map label for this gene is siaD

Identifier: 161869086

GI number: 161869086

Start: 72522

End: 73841

Strand: Reverse

Name: siaD

Synonym: NMCC_0075

Alternate gene names: NA

Gene position: 73841-72522 (Counterclockwise)

Preceding gene: 161869087

Following gene: 161869085

Centisome position: 3.43

GC content: 30.91

Gene sequence:

>1320_bases
ATGCAAAAATTAAAAAATAATTTACTGGTTATTTTATATACCACACAAAATATGAAAATGCCGAAATTAATTCAGAAATC
AGTTGATAAAGAATTATTTTCAGTAACTTACATGTTTGAACTCCCAAGAAAGCCGGGAATCGTTTCCCCAAAAAAATTCC
TATATATCCAGCGTGGATATAAGAAGCTTCTCAAAACTATCCAACCTGCACACCTTTATGTTATGTCTTTTGCTGGGCAT
TATTCCTCTCTGCTCAGCTTAGCAAAAAAAATGAATATCACAACACATTTAGTAGAAGAGGGAACCGCAACCTATGCCCC
ACTCTTAGAATCATTTACATACAAACCCACAAAATTTGAGCAACGTTTTGTGGGTAACAACTTACATCAAAAAGGCTATT
TTGATAAATTTGATATTTTGCATGTAGCTTTCCCTGAGTATGCGAAAAAAATTTTCAATGCTAATGAATACCACCGTTTT
TTTGCACATTCAGGCGGGATTAGCACAAGCCAATCTATTGCTAAAATTCAAGACAAATACCGCATATCTCAAAATGACTA
TATTTTTGTAAGTCAACGCTATCCTGTTTCAGATGAAGTTTATTATAAAACTATTGTCGAAACATTAAATCAAATGAGTT
TGCGAATAGAAGGTAAAATTTTTATTAAACTCCATCCTAAAGAAATGGAGAATAAAAATATTATGTCTTTATTCCTGAAT
ATGGTAACAATTAATCCCCGTCTAGTAGTGATTAATGAACCCCCTTTTCTCATTGACCCACTAATTTATTTAACAACCCC
TAAAGGAATTATTGGACTGACATCGACTTCTATTGTTTATACACCTTTACTTTCCCCTACTACCCAATGTCTGTCAATTG
GGCAAATCGTGATTGATTCGATACACCATACAGCCCAACAAGAGAACACCGCTTTAATTGAAGAGCATTTAGAGATTGTT
AAACAATTCGATTTTATTAAAATATTATCAAGTATAGAGGATGGTATAGACACCAATTCTTTTAAGACAGAAGAAACATT
AGAAATGCTTCTAAAATCAGCTGAATATGCATATAAAAACAAAAACTTTTACCAAGCAATTTTTTATTGGCAACTGGCCA
GTAATAATGATCTATCTGTATTAGGCTATAAATCATTATGGTATTACAATGCCCTTAATAAAGTTAAGCAGAATTATAAA
ATGAAATATTTAGAAATTAACTACATTGAAAGAATTTCCTTATATTTTAATGATAAAGATAAAATGATTTGGCAAAACAT
CAAAAATGATTTTTTTAAATATAGCCTTTGTAACCAATAA

Upstream 100 bases:

>100_bases
GTGGTTTGCAACACCTTTATTTAGCAGCTTCGCACCCAAAAGCAATCTTTTTATTATTTCTACATTTGCCCAACTTAATC
AAGCTCATAGTCTGACTAAG

Downstream 100 bases:

>100_bases
ATATATTTAAGCTGGAGTCTTATTCATCATGTCAATCAATACGTTTGAAACCTTTATTTACGAATTATACCAATCAACTA
ATTTCGCAGAAATTGCTCGC

Product: alpha-2,8 polysialyltransferase

Products: NA

Alternate protein names: Sialyltransferase; Polysialic Acid Capsule Biosynthesis Protein SiaD; Alpha-2 9-Polysialyltransferase

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVSPKKFLYIQRGYKKLLKTIQPAHLYVMSFAGH
YSSLLSLAKKMNITTHLVEEGTATYAPLLESFTYKPTKFEQRFVGNNLHQKGYFDKFDILHVAFPEYAKKIFNANEYHRF
FAHSGGISTSQSIAKIQDKYRISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIKLHPKEMENKNIMSLFLN
MVTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYTPLLSPTTQCLSIGQIVIDSIHHTAQQENTALIEEHLEIV
KQFDFIKILSSIEDGIDTNSFKTEETLEMLLKSAEYAYKNKNFYQAIFYWQLASNNDLSVLGYKSLWYYNALNKVKQNYK
MKYLEINYIERISLYFNDKDKMIWQNIKNDFFKYSLCNQ

Sequences:

>Translated_439_residues
MQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVSPKKFLYIQRGYKKLLKTIQPAHLYVMSFAGH
YSSLLSLAKKMNITTHLVEEGTATYAPLLESFTYKPTKFEQRFVGNNLHQKGYFDKFDILHVAFPEYAKKIFNANEYHRF
FAHSGGISTSQSIAKIQDKYRISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIKLHPKEMENKNIMSLFLN
MVTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYTPLLSPTTQCLSIGQIVIDSIHHTAQQENTALIEEHLEIV
KQFDFIKILSSIEDGIDTNSFKTEETLEMLLKSAEYAYKNKNFYQAIFYWQLASNNDLSVLGYKSLWYYNALNKVKQNYK
MKYLEINYIERISLYFNDKDKMIWQNIKNDFFKYSLCNQ
>Mature_439_residues
MQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVSPKKFLYIQRGYKKLLKTIQPAHLYVMSFAGH
YSSLLSLAKKMNITTHLVEEGTATYAPLLESFTYKPTKFEQRFVGNNLHQKGYFDKFDILHVAFPEYAKKIFNANEYHRF
FAHSGGISTSQSIAKIQDKYRISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIKLHPKEMENKNIMSLFLN
MVTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYTPLLSPTTQCLSIGQIVIDSIHHTAQQENTALIEEHLEIV
KQFDFIKILSSIEDGIDTNSFKTEETLEMLLKSAEYAYKNKNFYQAIFYWQLASNNDLSVLGYKSLWYYNALNKVKQNYK
MKYLEINYIERISLYFNDKDKMIWQNIKNDFFKYSLCNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51385; Mature: 51385

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVSPKKFLYIQRGY
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHH
KKLLKTIQPAHLYVMSFAGHYSSLLSLAKKMNITTHLVEEGTATYAPLLESFTYKPTKFE
HHHHHHCCHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCHHH
QRFVGNNLHQKGYFDKFDILHVAFPEYAKKIFNANEYHRFFAHSGGISTSQSIAKIQDKY
HHHHCCCCCCCCCCCCHHEEEEHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH
RISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIKLHPKEMENKNIMSLFLN
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEEEEEEEECCHHCCCCHHHHHHHH
MVTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYTPLLSPTTQCLSIGQIVIDS
HHEECCEEEEECCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHH
IHHTAQQENTALIEEHLEIVKQFDFIKILSSIEDGIDTNSFKTEETLEMLLKSAEYAYKN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
KNFYQAIFYWQLASNNDLSVLGYKSLWYYNALNKVKQNYKMKYLEINYIERISLYFNDKD
CCEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEECCCH
KMIWQNIKNDFFKYSLCNQ
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKLKNNLLVILYTTQNMKMPKLIQKSVDKELFSVTYMFELPRKPGIVSPKKFLYIQRGY
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHH
KKLLKTIQPAHLYVMSFAGHYSSLLSLAKKMNITTHLVEEGTATYAPLLESFTYKPTKFE
HHHHHHCCHHHEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCCCCCHHH
QRFVGNNLHQKGYFDKFDILHVAFPEYAKKIFNANEYHRFFAHSGGISTSQSIAKIQDKY
HHHHCCCCCCCCCCCCHHEEEEHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHH
RISQNDYIFVSQRYPVSDEVYYKTIVETLNQMSLRIEGKIFIKLHPKEMENKNIMSLFLN
EECCCCEEEEEECCCCCCHHHHHHHHHHHHHCEEEEEEEEEEEECCHHCCCCHHHHHHHH
MVTINPRLVVINEPPFLIDPLIYLTTPKGIIGLTSTSIVYTPLLSPTTQCLSIGQIVIDS
HHEECCEEEEECCCCCCCCCEEEEECCCCEEEECCCCEEEECCCCCHHHHHHHHHHHHHH
IHHTAQQENTALIEEHLEIVKQFDFIKILSSIEDGIDTNSFKTEETLEMLLKSAEYAYKN
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
KNFYQAIFYWQLASNNDLSVLGYKSLWYYNALNKVKQNYKMKYLEINYIERISLYFNDKD
CCEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEECCCH
KMIWQNIKNDFFKYSLCNQ
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA