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The map label for this gene is dksA [H]

Identifier: 161869073

GI number: 161869073

Start: 55650

End: 56066

Strand: Direct

Name: dksA [H]

Synonym: NMCC_0056

Alternate gene names: 161869073

Gene position: 55650-56066 (Clockwise)

Preceding gene: 161869072

Following gene: 161869075

Centisome position: 2.58

GC content: 50.12

Gene sequence:

>417_bases
ATGGCAAAGCTGACAGAACAAGATATTTTGAATTGGAGCGGGCCGGAAGACGATTATATGAATGACGACCATTTGGCTTT
TTTCCGCGAATTGCTGGTAAAAATGCAAGACGAACTCATCGAAAATGCTTCCGCTACGACAGGGCATCTCCAAGAACACG
AATCAGCCCCCGATCCTGCCGACCGTGCCACACAGGAAGAAGAGTACGCATTGGAACTCCGTACCCGCGATCGGGAACGA
AAACTTCTCAGTAAAATACAGGCGACCATCCGCAATATTGATGAAGGGGATTATGGATTCTGTGCCGATACGGGAGAGCC
TATCGGTCTGAAGCGGCTGCTGGCACGCCCGACAGCCACTTTATCTGTTGAGTCCCAAGAACGCCGAGAGAGGATGAAAA
AACAGTTTGCCGACTGA

Upstream 100 bases:

>100_bases
TTTTCAAAAACGCCTTAGGCAATAAGCCTTATAAAAATCAAAGGAATAAAGCCACTTTGTGGTGCTTTGTTTTTTTCGGT
GAACCGAGAGGATATACATT

Downstream 100 bases:

>100_bases
TGGCGGCAAACAAAATGCCGTCTGAAGCCCTAAGTTTCAGACAGTATATTCACAAAGGCGCACCAGTCAGAGGAGGGAGA
GGAAAGGATTGTTGGAGGTG

Product: DnaK suppressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRER
KLLSKIQATIRNIDEGDYGFCADTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD

Sequences:

>Translated_138_residues
MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRER
KLLSKIQATIRNIDEGDYGFCADTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD
>Mature_137_residues
AKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENASATTGHLQEHESAPDPADRATQEEEYALELRTRDRERK
LLSKIQATIRNIDEGDYGFCADTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD

Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 dksA C4-type zinc finger [H]

Homologues:

Organism=Escherichia coli, GI1786338, Length=124, Percent_Identity=45.1612903225806, Blast_Score=114, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012784
- InterPro:   IPR000962
- InterPro:   IPR020458 [H]

Pfam domain/function: PF01258 zf-dskA_traR [H]

EC number: NA

Molecular weight: Translated: 15897; Mature: 15766

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENASATTGHLQEHESAPDPA
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH
DRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCADTGEPIGLKRLLARPTAT
HHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHCCCCE
LSVESQERRERMKKQFAD
EECCHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENASATTGHLQEHESAPDPA
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCH
DRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCADTGEPIGLKRLLARPTAT
HHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHCCCCE
LSVESQERRERMKKQFAD
EECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 8063112 [H]