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The map label for this gene is ligD

Identifier: 161829752

GI number:

Start: 1943281

End: 1945728

Strand: Direct

Name: ligD

Synonym: COXBURSA331_A2135

Alternate gene names: NA

Gene position: NA

Preceding gene: 161830303

Following gene: 161829838

Centisome position: NA

GC content: NA

Gene sequence:

>2448_bases
GTGATTCTGTTGAGCCTGAAACATTATCGCCAAAAACGAGATTTTACCAAAACCTCCGAACCTCAGGGGGAAAGTGCTTC
CTCTAGTCAACAGTTCATTTACGTGATTCAAAAACACGATGCTTCACATTTGCATTACGACCTTCGCTTAGAATTAGACG
GTGTACTGAAAAGCTGGGCGGTTCCTAAAGGGCCTTCCTTAAATTCTGATCTAAAACGATTAGCTGTCGAAGTGGAGGAC
CATCCCATCGATTACGCCACTTTTGAAGGTAATATCCCTAAAGGACAATATGGTGCGGGTCCGGTTATTGTTTGGGATAA
AGGTACCTGGCAGCCCGAAGGGAATGCAAAAGAGAATTTAAAAAAAGGAAAGCTCGTCTTTATTATTAATGGTGAAAAAT
TAAAGGGAAAATGGGCGCTAGTAAGGCTTAAAACCGACGATTATAAGAATAATTGGCTATTAATTAAAAAAAAAGATCAT
TATGCCACCGAACGTTTTGATATCGATAATTATCCATTAAGCGTAATCAGTGGCGCTTCCATAGAAGAAATTAAAAATCA
CAAACTTGCCCTATCGCTAAGCGACTTAAAAAATGCAAAAAAAACAGTAGTTCCTGAATTTATCCAACCGCAACTCGCTA
AATTAAAGACAGTTGTGCCCGATTCACCGGATTGGATTCACGAGATTAAATTTGATGGCTATCGAATCATTTGTATTATT
AAAAAAGGAATTATTCAATTAATGACACGAAATCAAAAAAACTGGACTGAAAAATTAGCCGGGCTTGCAGAAACGATGAA
ATCAATACCTATCGATGAGTCAATACTGGATGGAGAAATAGTTGTTTTCGATGAATCGGGGAAAACAGATTTCCAGCTTC
TGCAAAATGCCATCAAAGCCAAGAAATACAATGAAATAAAATATTATCTCTTTGATATTCCTTTTTGCCAGAAATTTGAT
CTTAGCCAAGTGCCATTGATAATGAGAAAACGATTATTAAAAAAGTTAATTTTACAATGGAAAGAAAAAAGTGGAAGCAT
ACTTTATTCCAGTCATATAAAAGGAAATGGAAAAGCTATTCTAGAACGTGCTTGCGAGTTGGGTTTGGAAGGAATTATTT
CCAAAAAAATCGATGCTGCTTATGAGCAACGAAGAAGCTCTAGTTGGATAAAGCTCAAGTGTAAACGACAGCAAGAATTC
GTGATTGGTGGCTATACAAAACCGCGGGGAGAACAACTCTATTTTGGCGCTTTATTATTAGGCTATTATCAAAATAAAAA
ATTAATTTATTGTGGGAGGGTTGGCACTGGGTTTAGCAGTCTATCGTTAAAAGATATTTATGAAAAATTAATAAATCGCG
AACAAAAAGCCCCCGCCTTTTCTGAGTTACCTACTTTTGGAATAAAAGCAGGCAATCATTGGGTAAAACCCGAATTAGTG
GCTGAGATTGAATTCGCTGAGTGGACGAAAGATAAACGTTTGAGGCAGCCGGTTTTTAAAGGGTTGCGTGAAGACAAGGA
AGCTAAAGGAGTTAAATTAGAAACAGTTAAAAAAACGACAGTCAAAAATAAGCCTAATAATATTAAATTAACCAACCCTG
AAAAAATTCTATACCCCGAAGAAAAAATCACGAAACGCCAGTTGGCGGATTTTTATAGCAAAATAGCCGATCGCTTACTG
CCTCACATCGTTCACCGCCCGTTGATGCTGCTTCGTTGTTCGAATGGCTATAACAAAGAATGTTTTTTTCAAAAACATCC
TGATCAAAATGGCGAGGAATTTGTTTATAGCGTTGAAATAGAAGAAAAAGAAAGAAAAAGGTATCTGACGATTCATGATG
AAAAAGGCCTTCTTGCATTAGTTCAAATGGGCGTCTTGGAAATTCACCCGTGGGGCAGCAGCGATTCGCATCCGGAAAAA
CCAGACCGATTAATTTTTGATATTGATCCGCATCCGGCGGTCAGTTGGAAAGCCGTGATTAATTGCGCGACTGATGTTTT
TGAAGTATTGAAGGCTTTGGGTTTGCGAAGTTTTGTTAAGACTTCTGGAGGAAAAGGGTTGCACGTGTACGTTCCTATTC
AGCCGCAATTGGGTTGGGAGAAACTGCATGAATTCGCGCAGAAGTTGGCTAAATTAATTGTTCAGGTTAATCCACGTCTT
TATACAGCTGAATTGAGTAAAGGAAAACGGCTCAATAAAATATTTATCGATTATATTCGAAATAACCGAGGCGCCACTTG
TGTGGCGCCTTATAGCACCCGAGCAAAAAAGCATGTCCCTCTTTCCACCCCGGTTTCCTGGGATGAATTGTCAGCGGTAA
AATCCCCTACCCAATTTACGATAAAAAATATATTCCATCGCCTGGAGGCATTAAACCAAGACCCTTGGGAGGAGTTTTTC
GACATAAAACAATCAATCACTGCCTCGATGTGGAAATTTTTTAGTTAA

Upstream 100 bases:

>100_bases
AAGCTGCGCCAGTTAGCACCAACGTCGTTGACTTTATGCAGTTGCTTAAAAAGAGCATTCAAGAAAAAGAAAAAACTAAA
AAACACGCAAGCGGAAGTAG

Downstream 100 bases:

>100_bases
GTTTATGTGACGCAAGTTTATTTCTGTGTCATCCACCCACTCTATCCTATCATCACCCACCCGTGGTGAAGGGTGAAAAA
CTTAAAACCCGTCGTCCTCC

Product: DNA ligase D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>815_residues
MILLSLKHYRQKRDFTKTSEPQGESASSSQQFIYVIQKHDASHLHYDLRLELDGVLKSWAVPKGPSLNSDLKRLAVEVED
HPIDYATFEGNIPKGQYGAGPVIVWDKGTWQPEGNAKENLKKGKLVFIINGEKLKGKWALVRLKTDDYKNNWLLIKKKDH
YATERFDIDNYPLSVISGASIEEIKNHKLALSLSDLKNAKKTVVPEFIQPQLAKLKTVVPDSPDWIHEIKFDGYRIICII
KKGIIQLMTRNQKNWTEKLAGLAETMKSIPIDESILDGEIVVFDESGKTDFQLLQNAIKAKKYNEIKYYLFDIPFCQKFD
LSQVPLIMRKRLLKKLILQWKEKSGSILYSSHIKGNGKAILERACELGLEGIISKKIDAAYEQRRSSSWIKLKCKRQQEF
VIGGYTKPRGEQLYFGALLLGYYQNKKLIYCGRVGTGFSSLSLKDIYEKLINREQKAPAFSELPTFGIKAGNHWVKPELV
AEIEFAEWTKDKRLRQPVFKGLREDKEAKGVKLETVKKTTVKNKPNNIKLTNPEKILYPEEKITKRQLADFYSKIADRLL
PHIVHRPLMLLRCSNGYNKECFFQKHPDQNGEEFVYSVEIEEKERKRYLTIHDEKGLLALVQMGVLEIHPWGSSDSHPEK
PDRLIFDIDPHPAVSWKAVINCATDVFEVLKALGLRSFVKTSGGKGLHVYVPIQPQLGWEKLHEFAQKLAKLIVQVNPRL
YTAELSKGKRLNKIFIDYIRNNRGATCVAPYSTRAKKHVPLSTPVSWDELSAVKSPTQFTIKNIFHRLEALNQDPWEEFF
DIKQSITASMWKFFS

Sequences:
NA

Specific function: NA

COG id: COG1793

COG function: function code L; ATP-dependent DNA ligase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA