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The map label for this gene is rpoC

Identifier: 161829737

GI number:

Start: 289625

End: 293869

Strand: Direct

Name: rpoC

Synonym: COXBURSA331_A0329

Alternate gene names: NA

Gene position: NA

Preceding gene: 161831303

Following gene: 161831264

Centisome position: NA

GC content: NA

Gene sequence:

>4245_bases
TTGAGAGACTTAGTAAAACAGCTAAAAAGTGAAAAACACACGGCTGAATTCGATGCATTGCGTATCAAGCTGGCATCTCC
AGAAGAAGTTCGTTCGTGGTCGTACGGTGAAGTGAAAAAACCGGAAACGATTAATTATCGTACCTTTAAACCCGAACGCG
AAGGATTATTTTGCGCAAAAATTTTTGGTCCTATTAAAGATTACGAATGTTTATGTGGTAAATATAAACGTTTAAAACAT
CGCGGTGTCATCTGCGAAAAATGCGGTGTTGAAGTGACCTTAGCAAAAGTGCGTCGCGAACGCATGGGTCATATTGAGCT
GGCTTCACCGGTGGCTCACATTTGGTACCTTAAATCATTACCTTCTCGCATCGGTTTGCTATTAGACGTGACGCTGCGTG
ATATCGAACGCATTTTATATTTTGAAGCTTATGTAGTGGTAGACCCGGGGATGACCGATTTAGAACCCCGGCAATTACTT
TCAGAAGAGGCCTACCTAGATGCCTTAGAAGAATATGGCGATGATTTTACGGCCTTGATGGGCGCGGAAGCCATCCAACG
TTTATTGCGTGACATTGATGTTGAAGCAGAAGTGGAAGCCTTACGCACCGAACTTCAAACCACGACTTCTGAAACCAAAA
CGAAAAAACTAACCAAACGGCTCAAGGTATTAAGTGCATTTTTAGAGTCGGGAAATAAACCCGAATGGATGATATTAACC
GTATTGCCCGTTTTACCGCCGGATTTACGGCCTTTAGTTCCATTGGATGGTGGGCGTTTTGCCACCTCAGATTTAAATGA
TCTTTACCGTCGGGTGATTAACCGTAACAACCGATTGAAGCGGTTGTTGGATCTCAATGCGCCCGACATCATCGTTCGCA
ATGAAAAACGCATGCTACAAGAAGCGGTCGACGCATTGCTCGATAACGGCCGGCGCGGACGAGCCATTTTGGGCTCAAAC
CGCCGTCAACTGAAATCATTAGCCGACATGATTAAAGGAAAATCGGGTCGTTTCCGCCAAAATTTATTGGGTAAGCGAGT
CGATTATTCAGGCCGTTCCGTCATCGTCGTTGGGCCTACATTGAAATTACATCAGGCCGGTTTGCCGAAGAAAATGGCGT
TAGAGTTATTTAAACCGTTTATCTTTAGTAAATTGCAACTGCGAGGTTTAGCCACTACCGTCAAAGCTGCTAAGAAATTG
GTAGAAAATGAAGGGCCGGAAGTTTGGGATATTCTCGAAGAAGTGATTCGCGAACACCCCATTTTATTAAACCGCGCACC
CACGCTACACCGTTTGGGAATTCAGGCATTTGAACCGGTGCTGGTGGAAGGAAAGGCCATTCAATTACACCCGCTCGTTT
GTACAGCCTATAACGCTGACTTTGACGGCGACCAAATGGCCGTGCACGTCCCATTGACGCTCGAAGCGCAACTGGAAGCG
CGCTCGTTGATGATGTCCACTAATAACGTTTTGCATCCAGCCAATGGTGAGCCGATTATCGTTCCCTCTCAAGACGTGGT
GCTGGGTCTTTATTACATCACGCGTGACCGCGTTAATGCTAAAGGAGAGGGCATGCGATTTGCTGATGCCCAAGAAGTGG
TCCGCGCTTACGAAAATGACCAAGTGGATTTACACGCTCGGATTACCGTGCGCATCAAAGAAGGCATTTTAAACGAAGCA
GGAGAAATAGAAGAAAGCGACCGCTTGGTAAATACCGCCGCCGGCCGAATTTTATTATGGCAAATTGTTCCTAAAGGGTT
GCCGTTCGCATTAGTGGATCAACCGATGACGAAAAAAGCGGTAACAAAATTACTTGACTTCTGCTACCGCAATTTAGGAC
TGAAAACCACCGTTATTTTTGCGGATAAATTAATGTATATGGGATTTCATTACGCGACCCATTCTGGCGTTTCCATTGGG
ATTAATGACCTTGTCGTCCCCGACCAAAAAGAAGCCATTATATCCCGGGCTGAAGATGAAGTTCGTGAAATTGAAAAACA
ATATGCTTCCGGTTTAGTGACTCACGGGGAGCGGCGAAATAAAGTGATTGATATTTGGTCCCGCACCAATGACCAAGTGG
CCAAAGCGATGATGGAAAAAATCGCTGTTGAAAAAGTTAAAGATGCTGAAGGCAAAGAAGTCGCACAAAGCTCTTTTAAT
TCTATTTACATGATGTCCGATTCCGGCGCCCGAGGTTCCGCAGCACAAACTCGCCAATTAGCGGGAATGCGGGGTTTGAT
GGCAAGACCGGATGGCACCATTATCGAAACGCCCATTACGGCAAACTTCCGAGAAGGTTTGAACGTCTTACAATACTTCA
TTTCGACCCACGGGGCGCGCAAAGGTCTTGCCGATACCGCGTTGAAAACCGCTAACTCGGGTTATTTAACCCGGCGTTTA
GTTGACGTGGCTCAAGACTTAGTCGTCACGGAACACGATTGCGGGACGGAAGCTAGTATTGAAATGATGCCCCATATTGA
AGGGGGCGATGTGGTTGAGCCATTGCGGGAACGCGTGTTGGGACGAATATTGGCAGAGCCCGTAATGGATCCGAAGTCGA
GGAAAGAATTGCTCGCCAAAGATACTTTTCTGGATGAAAGACGGGTTGACATTCTGGAAGAGCACAGCATTGACCGAGTA
AGGGTCCGATCGGCCATTACCTGCGAGGCGCGTTATGGAATTTGCTCGATGTGTTATGGACGCGACCTGGCGCGCGGCCA
CGTTGTTAATGTGGGAGAAGCAATTGGGGTGGTGGCCGCCCAATCCATCGGGGAACCTGGCACGCAGTTGACCATGCGTA
CCTTCCATATCGGGGGTGCTGCTTCGCGAGCCACTGCAGCCAATAATATTGGGGTAAAATCCACCGGCAAAATCAAATTG
CGTAATTTGAAAACCGTTGAGCAAGCGCAAGGGAATTTAGTCGCTGTTTCTCGTTCCGGTGAATTAGTCGTTCAAGACCT
CCAAGGCAGTGAACGTGAACACTATAAAGTCCCCTATGGCGCGACCATCTCCGTACGAGATGGCGATTCAGTAAAAGCGG
GCCAAATCGTGGCGCAATGGGATCCTCATACCCATCCGATCATTACTGAAGTCGCGGGTACGTTAAGGTTTGTGGATTTG
GTCGATGGGGTCACCATGAATCGACAAACCGACGAATTAACCGGCCTTAGCAGTATTGTTATCACTTCCACCAAGCAACG
CAGTGCGAGCGGCAAAGAGTTGCGGCCAATGGTGAAGTTAGTGGACAAGAATGATGATGATCTTTTCTTGCCGGGCGGGA
AAGTGCCGGCTCATTACTTCTTGCCGGAAGGAACTTTTCTTACGAAGGAAGATGGCACAACGGTCAACATTGGTGACGTG
CTGGCGCGTATCCCGCAAGAGACCTCCAAAACGCGTGATATCACCGGTGGTCTTCCTCGAGTAGCCGACCTGTTTGAAGC
TCGACGGCCCAAGGATGCCGCTATTCTCGCTGAAATTTCAGGGGTCGTAAGTTTTGGGAAAGACACCAAAGACAAAGGTC
GCTTAATTATTACGGCGCCCGATGGCACAACGCACGAGGAATTAATTCCAAAATGGCGTCACGTAAGTGTCTTTGAAGGT
GAAACGGTGGAGAAGGGTGAAGTCATCGCCGATGGCCCTCGGGATCCGCACGATATTCTTCGACTATTGGGCGTCAACGC
GCTGGCGAACTACATCGTGAATGAAGTACAGGAAGTTTACCGACTGCAAGGCGTGAAAATTAACGATAAACACATTGAAG
TCATTGTGCGCCAGATGCTTCGTAAGGTAAAAATTACTCAGCCGGGTGATACTGACTTATTGCAAAATGAACAAGTGGAG
CGTACTCGAGTACGCGAAGAAAACGAAAAAATAATTAAAAAAGATGGCACAGTGGCCAAGGTAGAACCGATTTTACTCGG
AATCACTAAAGCGTCCTTAGCTACTGAATCTTTTATATCAGCGGCATCGTTCCAGGAGACCACGCGAGTATTAACGGCGG
CCTCTGTGGCAGGTAAACGCGATGATTTACGTGGATTAAAAGAGAACGTTATCGTGGGACGTCTAATTCCGGCGGGCACC
GGGTTCAGCTATCATCAGCAGCGACGTGCCGTTGCTGGGAAAAGTGTTGAGGAGAAGGAAATAGAAGAAAAACGGGTAAC
GGCGAGCGAAGCGGAGCAGGCTTTAAGCGAAGCCCTCAAATCTTCCGCACCGCAAGAAGCAAAAGCAGCGCAAAAAGACG
AGTAA

Upstream 100 bases:

>100_bases
CATACATAGAAGTATGTGAGCAGCAGACCACAGAAAATCAACGGGTTATGGCCAGCATAATAGAATTGATGACAGGCCCT
AATAAGCCTGGGAGAAAGCC

Downstream 100 bases:

>100_bases
ATTAAGAATCAATTGCACAAAGCACTCCCCTTTCCGTCCAGGGGTGTTGGGTGCGATTGAAAGCGTAGGTTTTCTACGTC
GCCTCGCGGGCCTAGTAACT

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1414_residues
MRDLVKQLKSEKHTAEFDALRIKLASPEEVRSWSYGEVKKPETINYRTFKPEREGLFCAKIFGPIKDYECLCGKYKRLKH
RGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWYLKSLPSRIGLLLDVTLRDIERILYFEAYVVVDPGMTDLEPRQLL
SEEAYLDALEEYGDDFTALMGAEAIQRLLRDIDVEAEVEALRTELQTTTSETKTKKLTKRLKVLSAFLESGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPDIIVRNEKRMLQEAVDALLDNGRRGRAILGSN
RRQLKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQAGLPKKMALELFKPFIFSKLQLRGLATTVKAAKKL
VENEGPEVWDILEEVIREHPILLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLVCTAYNADFDGDQMAVHVPLTLEAQLEA
RSLMMSTNNVLHPANGEPIIVPSQDVVLGLYYITRDRVNAKGEGMRFADAQEVVRAYENDQVDLHARITVRIKEGILNEA
GEIEESDRLVNTAAGRILLWQIVPKGLPFALVDQPMTKKAVTKLLDFCYRNLGLKTTVIFADKLMYMGFHYATHSGVSIG
INDLVVPDQKEAIISRAEDEVREIEKQYASGLVTHGERRNKVIDIWSRTNDQVAKAMMEKIAVEKVKDAEGKEVAQSSFN
SIYMMSDSGARGSAAQTRQLAGMRGLMARPDGTIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRL
VDVAQDLVVTEHDCGTEASIEMMPHIEGGDVVEPLRERVLGRILAEPVMDPKSRKELLAKDTFLDERRVDILEEHSIDRV
RVRSAITCEARYGICSMCYGRDLARGHVVNVGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRATAANNIGVKSTGKIKL
RNLKTVEQAQGNLVAVSRSGELVVQDLQGSEREHYKVPYGATISVRDGDSVKAGQIVAQWDPHTHPIITEVAGTLRFVDL
VDGVTMNRQTDELTGLSSIVITSTKQRSASGKELRPMVKLVDKNDDDLFLPGGKVPAHYFLPEGTFLTKEDGTTVNIGDV
LARIPQETSKTRDITGGLPRVADLFEARRPKDAAILAEISGVVSFGKDTKDKGRLIITAPDGTTHEELIPKWRHVSVFEG
ETVEKGEVIADGPRDPHDILRLLGVNALANYIVNEVQEVYRLQGVKINDKHIEVIVRQMLRKVKITQPGDTDLLQNEQVE
RTRVREENEKIIKKDGTVAKVEPILLGITKASLATESFISAASFQETTRVLTAASVAGKRDDLRGLKENVIVGRLIPAGT
GFSYHQQRRAVAGKSVEEKEIEEKRVTASEAEQALSEALKSSAPQEAKAAQKDE

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA