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The map label for this gene is potD [C]

Identifier: 161526304

GI number: 161526304

Start: 3425261

End: 3426316

Strand: Direct

Name: potD [C]

Synonym: Bmul_3135

Alternate gene names: 161526304

Gene position: 3425261-3426316 (Clockwise)

Preceding gene: 161526301

Following gene: 161526305

Centisome position: 99.33

GC content: 65.06

Gene sequence:

>1056_bases
ATGAACGAAGTGCCGGTATGCAAGCGTGTGAAGGCATGGGCAGCGGGTGCGGCGCGCTGCGCCCTGGTCGCGGCGATCGC
GCTCGGCGCGGCTCAGGCGGCGCACGCGAAAACGTCGCTGCTCGTCTATACCGCGCTCGAAGACGAGGCGATGAAGCCGT
ACAAGGATGCGTTCGAGAAAGCGAACCCCGACATCGAGATCCGCTGGGTGCGCGACTCGACCGGCTCGGTCACCGCGAAG
CTGCTCGCGGAAAAGAACAATCCGCGCGCCGACGTCGTGCTCGGGCTCGCCGCGTCGAGCCTCACGCTGCTGGATCTGCA
AGGCATGCTGATGCCGTACGCGCCGAAGGGCTTCGAGCAGCTCACGCGCAAATACAGCGACGCGAACAATCCGCCGCACT
GGGTCGGGATGGACGTCTGGGGCGCGACGATCTGCTACAACCGCGTGGTCGGGCAGGCGAAGGGCATTCCGAAGCCGACG
TCGTGGGAAGACCTGACGAAGCCCGTCTACAAGGGCGCGATCGTGATGCCGAGCCCCGTGTCGTCGGGCACCGGCTATCT
CGACGTGACCGCGTGGCTGCAGACGTTCGGCGAAGACCGCGGCTGGAAATTCATGGATGCGCTCGACAAGAACGTCGCGC
AGTACGTGCATTCGGGCTCGAAACCCTGCACGCTCGCGGGCACCGGCGAATTCCCGGTCGGCATCTCGTTCGAGTTTCGC
GGCCACGAACTGCAGGCGCAGGGCGCGCCGATCGATCTCGTGTTCCCGAAGGAAGGGCTCGGCTGGGACATGGAAGGCAC
CGCGATCATGAAGACGACGAAGCAGCCCGACGCCGCGAAGAAGCTCGCCGACTTCATGGCGAGCAAGCAGGCGAACGAAA
TCACCGCGCGCTGGTGGGCGATCGTCGCGTATCCGGGCGTCGCGCGCAAGCTTGCCGGCATCCCGGACAACTACGCGGAT
CTGCTCGTGAAGAACGACTTCGTCTGGTCGGCGAAGAACCGCACGTCGATTCTCGACACGTGGCAGAAGCGCTACGGAGC
AAAAGCGCAGCAGTAA

Upstream 100 bases:

>100_bases
ACAACATGCAAAGAACAGCAGGCAGAGTACCGACAACAAAGAGAGGGCAGGTCTTCACTTAACCGCCGCGTGCCGCGGCG
TCACAGTCAAGGGGTCTGAG

Downstream 100 bases:

>100_bases
CGCCGCGACCCGCAGCGGGGCCGCGCCGCGCGCCGCCCCGCGTCCCTTTCCTCGTCGAACGCGGCCTGCAGGCCGCAGCG
TGGAGGCGCGCATGGCACCT

Product: 2-aminoethylphosphonate ABC transporter 1-aminoethylphosphonate-binding protein

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MNEVPVCKRVKAWAAGAARCALVAAIALGAAQAAHAKTSLLVYTALEDEAMKPYKDAFEKANPDIEIRWVRDSTGSVTAK
LLAEKNNPRADVVLGLAASSLTLLDLQGMLMPYAPKGFEQLTRKYSDANNPPHWVGMDVWGATICYNRVVGQAKGIPKPT
SWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGEDRGWKFMDALDKNVAQYVHSGSKPCTLAGTGEFPVGISFEFR
GHELQAQGAPIDLVFPKEGLGWDMEGTAIMKTTKQPDAAKKLADFMASKQANEITARWWAIVAYPGVARKLAGIPDNYAD
LLVKNDFVWSAKNRTSILDTWQKRYGAKAQQ

Sequences:

>Translated_351_residues
MNEVPVCKRVKAWAAGAARCALVAAIALGAAQAAHAKTSLLVYTALEDEAMKPYKDAFEKANPDIEIRWVRDSTGSVTAK
LLAEKNNPRADVVLGLAASSLTLLDLQGMLMPYAPKGFEQLTRKYSDANNPPHWVGMDVWGATICYNRVVGQAKGIPKPT
SWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGEDRGWKFMDALDKNVAQYVHSGSKPCTLAGTGEFPVGISFEFR
GHELQAQGAPIDLVFPKEGLGWDMEGTAIMKTTKQPDAAKKLADFMASKQANEITARWWAIVAYPGVARKLAGIPDNYAD
LLVKNDFVWSAKNRTSILDTWQKRYGAKAQQ
>Mature_351_residues
MNEVPVCKRVKAWAAGAARCALVAAIALGAAQAAHAKTSLLVYTALEDEAMKPYKDAFEKANPDIEIRWVRDSTGSVTAK
LLAEKNNPRADVVLGLAASSLTLLDLQGMLMPYAPKGFEQLTRKYSDANNPPHWVGMDVWGATICYNRVVGQAKGIPKPT
SWEDLTKPVYKGAIVMPSPVSSGTGYLDVTAWLQTFGEDRGWKFMDALDKNVAQYVHSGSKPCTLAGTGEFPVGISFEFR
GHELQAQGAPIDLVFPKEGLGWDMEGTAIMKTTKQPDAAKKLADFMASKQANEITARWWAIVAYPGVARKLAGIPDNYAD
LLVKNDFVWSAKNRTSILDTWQKRYGAKAQQ

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. Polyamine Binding Protein. [C]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 460 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Stationary Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 38299; Mature: 38299

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEVPVCKRVKAWAAGAARCALVAAIALGAAQAAHAKTSLLVYTALEDEAMKPYKDAFEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCHHHHHHHH
ANPDIEIRWVRDSTGSVTAKLLAEKNNPRADVVLGLAASSLTLLDLQGMLMPYAPKGFEQ
CCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEHHCCEEEEECCCCCCCCCCCCHHH
LTRKYSDANNPPHWVGMDVWGATICYNRVVGQAKGIPKPTSWEDLTKPVYKGAIVMPSPV
HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCCC
SSGTGYLDVTAWLQTFGEDRGWKFMDALDKNVAQYVHSGSKPCTLAGTGEFPVGISFEFR
CCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEC
GHELQAQGAPIDLVFPKEGLGWDMEGTAIMKTTKQPDAAKKLADFMASKQANEITARWWA
CCEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEE
IVAYPGVARKLAGIPDNYADLLVKNDFVWSAKNRTSILDTWQKRYGAKAQQ
EEECCCHHHHHCCCCCCHHHHEEECCEEEECCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNEVPVCKRVKAWAAGAARCALVAAIALGAAQAAHAKTSLLVYTALEDEAMKPYKDAFEK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHCCHHHHHHHH
ANPDIEIRWVRDSTGSVTAKLLAEKNNPRADVVLGLAASSLTLLDLQGMLMPYAPKGFEQ
CCCCEEEEEEECCCCCEEEEEEECCCCCCEEEEEEEHHCCEEEEECCCCCCCCCCCCHHH
LTRKYSDANNPPHWVGMDVWGATICYNRVVGQAKGIPKPTSWEDLTKPVYKGAIVMPSPV
HHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCCC
SSGTGYLDVTAWLQTFGEDRGWKFMDALDKNVAQYVHSGSKPCTLAGTGEFPVGISFEFR
CCCCCEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEEEC
GHELQAQGAPIDLVFPKEGLGWDMEGTAIMKTTKQPDAAKKLADFMASKQANEITARWWA
CCEEECCCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHEEEEE
IVAYPGVARKLAGIPDNYADLLVKNDFVWSAKNRTSILDTWQKRYGAKAQQ
EEECCCHHHHHCCCCCCHHHHEEECCEEEECCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]