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The map label for this gene is regB [H]

Identifier: 161526259

GI number: 161526259

Start: 3372700

End: 3374103

Strand: Reverse

Name: regB [H]

Synonym: Bmul_3090

Alternate gene names: 161526259

Gene position: 3374103-3372700 (Counterclockwise)

Preceding gene: 161526260

Following gene: 161526258

Centisome position: 97.84

GC content: 70.8

Gene sequence:

>1404_bases
ATGCAACGAATCACCACCACCGGGCGCGTCAATCTGAGTCACCTGTTCTGGCTGCGCAATCTCGCGATCATCGGCCAGCT
CGTGACGATCGGCGTCGTGCAGACGTATTTCGGCGTGCATCTGCCGTTGCCGGCGATGCTGATGGTCATCGCGCTCGAAA
TCGTCTTCAACGCGCTGACGTGGGTGCGCGTGTTGCGCGCGCGTCCGGAGACGAACTTCGAGCTGCTCGGCCAGCTGTGG
GTCGACCTCGGTGCGCTGTCGGCGCTGCTGTTCCTGTCGGGCGGCACGACGAATCCGTTCGTGTCGCTGTATCTGCCGTC
GCTCGCGATTGCGGCGGCCGTGCTGCCGTGGCATCTGATGATCTGGCTCGCGGCGTTTGCCGTCGCCTGCTACGCGGCGC
TCGGTTTCGATTCGGTGCCGCTGAACATGGACAATCCGGCGAACCTGTTCGACTACTACCGCACCGGGATGTGGGTGAAC
TTCATGGTGAGCGTCGGGCTGATCGCGTGGTTCGTCGCGCGCATGTCGAATGCGCTGCGGCAGCGCGATTCGGCGCTCGG
CGACGCGCAGCAGCGGCTGCTGCGCGACGAGCGCGCGGTCGCGCTCGGCGTGCAGGCCGCGACGGTCGCACACGAAATGG
GCACGCCGCTGTCGACGATCGCGATGCTCGCCGAAGAGCTGCGCGATGCCGCGCGCGACGATCCGGGGCTCGCGCGCTAC
GAGGCCGACCTGAAAGTGCTCGAAGAACAGATGATGCTGTGCACGTCGGCGCTCGCGCGCCTGCGCAGCCGCGCAAGTGC
GCCGGCGAGCCGGCAGCCGGTCGACGAGTGGCTCGACACGTTCGTCGAGCACTGGCGCCTGCGGCATCCGCACGTGCAGT
TCGAGCTGCTCGGGGCGCGCCCGTCCGGCGTCGCGCTCGACGATACGGTCGCGGCCGGCCAGATCCTGACGATCCTGCTC
GACAACGCGGCGCGCGCGAGCCCGCACCGCGTGACGCTGGCCGCGAAGGTCGTGCACGATCGCACGCCAGACCAGATTGC
ATTCGAAGTATGCGACGACGGGCCCGGCATTCCGGCCGCGCTGCGCGAATCGCTCGGCGCGATGCCGGTCGACAGCACGC
AGGGCGGGCACGGTGTCGGCCTGTATCTCGCATTCAGCGCGGCGGCGCGTCTGGGCGGCGAGATCGAGCTGTCCGACGTG
ACGCCGCGCGTCGGCGGCGCCGCACGGGCGGGCGCCGCCACGGCGGCGGCCGCGCAGGCATCGGGCCAGGGCGCGGCGCC
GGCCGAACGCGCGGCAGGCGCGGACGGCCGGCCAGTCGCCGGCGGCCGCGGCACGCGCGCCGTGCTGCGACTGCCGGTCG
CACGCATCGCGGTGCAGCCGGCGGCCGCCTCCCACCACACGTAG

Upstream 100 bases:

>100_bases
GACGCGCGGCGCGCGAAAGCGGCGGCGAACGATCGTGCCGGCGCGCGCGCCGATCCGGCCCCGCTGGAGGCGCCGCACGC
GAAACGGGTAAACTGCCCGG

Downstream 100 bases:

>100_bases
ACGGAGAGAAACCTATGAGCGACAACAATTTCCTGGTGATCGACGACAACGAGGTCTTCGCGGGCACGCTTGCGCGCGGC
CTCGAGCGCCGCGGCTATGC

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVN
FMVSVGLIAWFVARMSNALRQRDSALGDAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
EADLKVLEEQMMLCTSALARLRSRASAPASRQPVDEWLDTFVEHWRLRHPHVQFELLGARPSGVALDDTVAAGQILTILL
DNAARASPHRVTLAAKVVHDRTPDQIAFEVCDDGPGIPAALRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
TPRVGGAARAGAATAAAAQASGQGAAPAERAAGADGRPVAGGRGTRAVLRLPVARIAVQPAAASHHT

Sequences:

>Translated_467_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVN
FMVSVGLIAWFVARMSNALRQRDSALGDAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
EADLKVLEEQMMLCTSALARLRSRASAPASRQPVDEWLDTFVEHWRLRHPHVQFELLGARPSGVALDDTVAAGQILTILL
DNAARASPHRVTLAAKVVHDRTPDQIAFEVCDDGPGIPAALRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
TPRVGGAARAGAATAAAAQASGQGAAPAERAAGADGRPVAGGRGTRAVLRLPVARIAVQPAAASHHT
>Mature_467_residues
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALTWVRVLRARPETNFELLGQLW
VDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLMIWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVN
FMVSVGLIAWFVARMSNALRQRDSALGDAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
EADLKVLEEQMMLCTSALARLRSRASAPASRQPVDEWLDTFVEHWRLRHPHVQFELLGARPSGVALDDTVAAGQILTILL
DNAARASPHRVTLAAKVVHDRTPDQIAFEVCDDGPGIPAALRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDV
TPRVGGAARAGAATAAAAQASGQGAAPAERAAGADGRPVAGGRGTRAVLRLPVARIAVQPAAASHHT

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 49854; Mature: 49854

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
WVRVLRARPETNFELLGQLWVDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVNFMVSVGLIAWFVARMSNALR
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRDSALGDAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHH
EADLKVLEEQMMLCTSALARLRSRASAPASRQPVDEWLDTFVEHWRLRHPHVQFELLGAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
PSGVALDDTVAAGQILTILLDNAARASPHRVTLAAKVVHDRTPDQIAFEVCDDGPGIPAA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCHHHHHEECCCCCCCCHH
LRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDVTPRVGGAARAGAATAAAAQA
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCHHHHHHHHC
SGQGAAPAERAAGADGRPVAGGRGTRAVLRLPVARIAVQPAAASHHT
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQRITTTGRVNLSHLFWLRNLAIIGQLVTIGVVQTYFGVHLPLPAMLMVIALEIVFNALT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
WVRVLRARPETNFELLGQLWVDLGALSALLFLSGGTTNPFVSLYLPSLAIAAAVLPWHLM
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IWLAAFAVACYAALGFDSVPLNMDNPANLFDYYRTGMWVNFMVSVGLIAWFVARMSNALR
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRDSALGDAQQRLLRDERAVALGVQAATVAHEMGTPLSTIAMLAEELRDAARDDPGLARY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHH
EADLKVLEEQMMLCTSALARLRSRASAPASRQPVDEWLDTFVEHWRLRHPHVQFELLGAR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC
PSGVALDDTVAAGQILTILLDNAARASPHRVTLAAKVVHDRTPDQIAFEVCDDGPGIPAA
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHCCCCHHHHHEECCCCCCCCHH
LRESLGAMPVDSTQGGHGVGLYLAFSAAARLGGEIELSDVTPRVGGAARAGAATAAAAQA
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCHHHHHHHHC
SGQGAAPAERAAGADGRPVAGGRGTRAVLRLPVARIAVQPAAASHHT
CCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]