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The map label for this gene is ydcN [C]

Identifier: 161526194

GI number: 161526194

Start: 3306833

End: 3307678

Strand: Direct

Name: ydcN [C]

Synonym: Bmul_3025

Alternate gene names: 161526194

Gene position: 3306833-3307678 (Clockwise)

Preceding gene: 161526192

Following gene: 161526199

Centisome position: 95.89

GC content: 70.57

Gene sequence:

>846_bases
ATGGATTCAGACATCATGCGTATCGGCCAGCGCATTCGCCGCCTGCGCCGGGAGGCGAAGAAGACGCTGCTGGAAGTCGC
GACCGAAGCGAAGCTGTCGGTCGGATTCCTGTCCCAGGTCGAACGCCATCTGACGGGCATCTCCATTTCGTCGCTCGTCA
ACGTCGCGAAGGCGCTGAACGTGCCGCTCGGCGCGCTGATCGACCAGCCGCGCCAGGCGCAGCCCGATTCGCACGCGGGC
CGGCGCGAGTCGTATGCGGTCGACCGCACGTCGCAGTGGTACGAACGGCTGTCGACGACGTTCGACGGCAGCCAGCTCAA
TGCGCTGAAGGTCCGGATGATGGAGGGCTACCGCTCCGAATGGGTCGCGCACGGCGGCGACGAGTTCGTCTACGTGCTGA
GCGGCCGCATCTGCTACACGATCGGCAAGAAGGACTACCCGCTGTCGCCCGGCGATTCGCTGCACTTCGATGCGCGCAAG
CGGCACCGTGTCGCGAACGTCGGCGACGGGCCCGCGGAAGTGATCGCGGTCGGCACGCTGCCGCTGTTCGACGACAGCCG
CGCGACCTTCGTCTCGGCGACGCTGGACGTCGCGCAGCGCACGGGCGACGCGCAGGCCGACGCGCGGCATGCGCAGACGC
GCACACGCGATGCAGCGCCGCGCCGCCGTGCGCCGGTCGCGACGAAGCGCGCGGCAAAGCACGCCGCCAAGTCCGCCGCG
CAGTCGGCCCCCACGTCCGCCGATGCCGGCGCGGCGGCATCCGATAGCGAATCGCCCGCGCGCGTCGGTCGCCGCACGGC
GAGCGCACCCGCTCCGCGCAAACGCGCGGCGCGCGCGAAGCCCTAA

Upstream 100 bases:

>100_bases
GCCCAAAACGGCCGTGCCGCGTGCGATTCGCGGAAAACCGCATCCGGGCCGCCGGCGCCGTCCGTCCCCGCCTTCCGGCT
CGCTGCCACGAAAGAGATTC

Downstream 100 bases:

>100_bases
AGCGTTGCCCCGGCAGCGGCGCAACCTGCCCGCCGCCTACGCCGACCGCCAAACCTGCCTGCGCTCAGGCGCACACCGTG
GCGCGCACCGCATACGCCGT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; MerR Family Transcriptional Regulator; Transcriptional Regulator XRE Family With Cupin Sensor; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; Transcriptional Regulator MerR Family; Cupin Domain Protein; Transcriptional Regulator XRE Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Xre Family; XRE Family-Like Protein

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALNVPLGALIDQPRQAQPDSHAG
RRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRSEWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARK
RHRVANVGDGPAEVIAVGTLPLFDDSRATFVSATLDVAQRTGDAQADARHAQTRTRDAAPRRRAPVATKRAAKHAAKSAA
QSAPTSADAGAAASDSESPARVGRRTASAPAPRKRAARAKP

Sequences:

>Translated_281_residues
MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALNVPLGALIDQPRQAQPDSHAG
RRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRSEWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARK
RHRVANVGDGPAEVIAVGTLPLFDDSRATFVSATLDVAQRTGDAQADARHAQTRTRDAAPRRRAPVATKRAAKHAAKSAA
QSAPTSADAGAAASDSESPARVGRRTASAPAPRKRAARAKP
>Mature_281_residues
MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALNVPLGALIDQPRQAQPDSHAG
RRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRSEWVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARK
RHRVANVGDGPAEVIAVGTLPLFDDSRATFVSATLDVAQRTGDAQADARHAQTRTRDAAPRRRAPVATKRAAKHAAKSAA
QSAPTSADAGAAASDSESPARVGRRTASAPAPRKRAARAKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30479; Mature: 30479

Theoretical pI: Translated: 10.97; Mature: 10.97

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
VPLGALIDQPRQAQPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRSE
CCHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
WVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVGTL
HHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEEEEECC
PLFDDSRATFVSATLDVAQRTGDAQADARHAQTRTRDAAPRRRAPVATKRAAKHAAKSAA
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
QSAPTSADAGAAASDSESPARVGRRTASAPAPRKRAARAKP
HCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MDSDIMRIGQRIRRLRREAKKTLLEVATEAKLSVGFLSQVERHLTGISISSLVNVAKALN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
VPLGALIDQPRQAQPDSHAGRRESYAVDRTSQWYERLSTTFDGSQLNALKVRMMEGYRSE
CCHHHHHCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
WVAHGGDEFVYVLSGRICYTIGKKDYPLSPGDSLHFDARKRHRVANVGDGPAEVIAVGTL
HHHCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHEEEEECC
PLFDDSRATFVSATLDVAQRTGDAQADARHAQTRTRDAAPRRRAPVATKRAAKHAAKSAA
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
QSAPTSADAGAAASDSESPARVGRRTASAPAPRKRAARAKP
HCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA