| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161526129
Identifier: 161526129
GI number: 161526129
Start: 3239809
End: 3240705
Strand: Reverse
Name: 161526129
Synonym: Bmul_2960
Alternate gene names: NA
Gene position: 3240705-3239809 (Counterclockwise)
Preceding gene: 161526131
Following gene: 161526127
Centisome position: 93.98
GC content: 68.0
Gene sequence:
>897_bases ATGTCGTTCGACGCGTTCGCACCGTTTCGCGTGACGGTGCAGGACACCGAGATCTTCGGTGTCAAAGGAGGCGCGGGGCC GCCGCTTCTGCTGCTGCACGGTCACCCGCAGACTCACGTGATCTGGCATCGCGTCGCCGCGACGCTCGCGAATCACTTCA CGGTGATCGCCACCGATCTGCGCGGTTACGGCGCGTCCGGCAAGCCGCCGAGCGACGCGCAGCATGCCCCGTATTCGAAA CGCGCGATGGCTGCCGATCAGGTGGCCGTGATGCGCCATTTCGGCTTCGCGCAATTTCACGTCTGCGCGCACGACCGCGG CGCGCGTGTCGCGCATCGGCTCGCGCTCGATCACCCGTCGGCCGTCGAGCGCATGATGCTGCTCGATATCGCGCCGACGC TCGCGATGTACGAGCAGACCGACCGCGCGTTCGCGACCGCCTATTTCCACTGGTTTTTCCTGATCCAGCCCGAGCCGCTG CCCGAAACGCTGATCGAAGGCCATACCGATGCCTACATCGAGCGTGTGATGGGCAACCGGTCGGCCGGGCTCGCGCCGTT CGCGCCGCATGCGCTCGACGCGTATCGCACGGCGCTCGCCCAGCCGGGCGCCGTACATGCGATGTGCGAGGACTATCGCG CCTCGGCGACGATCGATCTCGAGCACGACCGTGCCGATCTCGAACGCGGCAACAAGATCGCGTGCCCGCTGCGCGTGCTG TGGGGCGCGAACGGCGTCGTCGCGCGCTGCTTCGAGCCGCTCGACGAATGGCGGCGCGTCGCGCGCGACGTCAGCGGCCG CGCGCTCGACTGCGGGCACTACATCCCGGAAGAAGCGCCCGTCGCGCTGATCGACGAGATGCTCGCGTTCTTCGAGGCGC GCGAACCGGCCGTCTAA
Upstream 100 bases:
>100_bases ACGAGTGCTCTGTCTCTATGTGTTTTGGCTGCTGCGCCGCTCTTCGCGGTGGCCGGCGCTCCTACAATAGCCGCCATAAC GAACCTACGAGAAACAGACC
Downstream 100 bases:
>100_bases GGCGCCGGCTCGGCTCGGCTGGGTCGACGCGCCACGCGCCGCGCGTCAGCGGCGCGACTCCTCTTCTTCGACGAGCGGCG GCAGCCGACGCGGCACGGGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSFDAFAPFRVTVQDTEIFGVKGGAGPPLLLLHGHPQTHVIWHRVAATLANHFTVIATDLRGYGASGKPPSDAQHAPYSK RAMAADQVAVMRHFGFAQFHVCAHDRGARVAHRLALDHPSAVERMMLLDIAPTLAMYEQTDRAFATAYFHWFFLIQPEPL PETLIEGHTDAYIERVMGNRSAGLAPFAPHALDAYRTALAQPGAVHAMCEDYRASATIDLEHDRADLERGNKIACPLRVL WGANGVVARCFEPLDEWRRVARDVSGRALDCGHYIPEEAPVALIDEMLAFFEAREPAV
Sequences:
>Translated_298_residues MSFDAFAPFRVTVQDTEIFGVKGGAGPPLLLLHGHPQTHVIWHRVAATLANHFTVIATDLRGYGASGKPPSDAQHAPYSK RAMAADQVAVMRHFGFAQFHVCAHDRGARVAHRLALDHPSAVERMMLLDIAPTLAMYEQTDRAFATAYFHWFFLIQPEPL PETLIEGHTDAYIERVMGNRSAGLAPFAPHALDAYRTALAQPGAVHAMCEDYRASATIDLEHDRADLERGNKIACPLRVL WGANGVVARCFEPLDEWRRVARDVSGRALDCGHYIPEEAPVALIDEMLAFFEAREPAV >Mature_297_residues SFDAFAPFRVTVQDTEIFGVKGGAGPPLLLLHGHPQTHVIWHRVAATLANHFTVIATDLRGYGASGKPPSDAQHAPYSKR AMAADQVAVMRHFGFAQFHVCAHDRGARVAHRLALDHPSAVERMMLLDIAPTLAMYEQTDRAFATAYFHWFFLIQPEPLP ETLIEGHTDAYIERVMGNRSAGLAPFAPHALDAYRTALAQPGAVHAMCEDYRASATIDLEHDRADLERGNKIACPLRVLW GANGVVARCFEPLDEWRRVARDVSGRALDCGHYIPEEAPVALIDEMLAFFEAREPAV
Specific function: Catalyzes the hydrolytic defluorination of fluoroacetate to produce glycolate. Has low activity towards chloroacetate [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. Epoxide hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI218777840, Length=279, Percent_Identity=27.9569892473118, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI13376164, Length=279, Percent_Identity=27.9569892473118, Blast_Score=99, Evalue=4e-21, Organism=Homo sapiens, GI218777837, Length=232, Percent_Identity=23.7068965517241, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17554012, Length=240, Percent_Identity=22.9166666666667, Blast_Score=73, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.3 [H]
Molecular weight: Translated: 32925; Mature: 32794
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDAFAPFRVTVQDTEIFGVKGGAGPPLLLLHGHPQTHVIWHRVAATLANHFTVIATDL CCCCCCCCEEEEEECCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEC RGYGASGKPPSDAQHAPYSKRAMAADQVAVMRHFGFAQFHVCAHDRGARVAHRLALDHPS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHH AVERMMLLDIAPTLAMYEQTDRAFATAYFHWFFLIQPEPLPETLIEGHTDAYIERVMGNR HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHCCC SAGLAPFAPHALDAYRTALAQPGAVHAMCEDYRASATIDLEHDRADLERGNKIACPLRVL CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCHHHHHCCCEEECCEEEE WGANGVVARCFEPLDEWRRVARDVSGRALDCGHYIPEEAPVALIDEMLAFFEAREPAV ECCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SFDAFAPFRVTVQDTEIFGVKGGAGPPLLLLHGHPQTHVIWHRVAATLANHFTVIATDL CCCCCCCEEEEEECCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEC RGYGASGKPPSDAQHAPYSKRAMAADQVAVMRHFGFAQFHVCAHDRGARVAHRLALDHPS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCHH AVERMMLLDIAPTLAMYEQTDRAFATAYFHWFFLIQPEPLPETLIEGHTDAYIERVMGNR HHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHCCC SAGLAPFAPHALDAYRTALAQPGAVHAMCEDYRASATIDLEHDRADLERGNKIACPLRVL CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCHHHHHCCCEEECCEEEE WGANGVVARCFEPLDEWRRVARDVSGRALDCGHYIPEEAPVALIDEMLAFFEAREPAV ECCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA