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The map label for this gene is lrpC [H]

Identifier: 161526128

GI number: 161526128

Start: 3239272

End: 3239763

Strand: Direct

Name: lrpC [H]

Synonym: Bmul_2959

Alternate gene names: 161526128

Gene position: 3239272-3239763 (Clockwise)

Preceding gene: 161526126

Following gene: 161526130

Centisome position: 93.93

GC content: 69.31

Gene sequence:

>492_bases
ATGCCGAAACGCCTTTCCCCTCCGGCCGTCGCGTCGCTCGACGCGATCGACCGCGCAATCGTCGCGGCGCTCGCCGACGA
CGCGCGCATCGCGACGAGCGCACTCGCGCGACAGATCGGGCTATCGGCCCCGGCCACGGCCGACCGCGTGCGGCGCCTCG
AGGCACAGGGCGTGATCGCCGGCTTCACCGTCGAGCTCGATCCGCGCGCGCTCGGCTATACGCTGCAGGCGATCGTCCGC
GTGAAGCCGCTGCCCGGCCAGCTGCATCTCGTCGAGGAACTGCTGCGGCGCATTCCCGAATTCGTCGAATGCGACAAGGT
GACGGGCGACGACTGCTTCGTCTGCCGCCTCTATCTGCGCACGATCGAGCATCTCGACGGCATTCTGTCGAAGGTCACCG
AGCGCGCGGAGACGAGTACCGCGATCGTGAAGTCGACGCCCGTGCCGCGTCGGCTGCCGCCGCTCGTCGAAGAAGAGGAG
TCGCGCCGCTGA

Upstream 100 bases:

>100_bases
GAGCGGAATCGGATGACTTCGATTCTAGGAACTTGCAATCGCGCCGGCCACGGATAAACTGAAGCGAATCCCTCGATTCA
CCTTAGAAAGCAAAGCGATC

Downstream 100 bases:

>100_bases
CGCGCGGCGCGTGGCGCGTCGACCCAGCCGAGCCGAGCCGGCGCCTTAGACGGCCGGTTCGCGCGCCTCGAAGAACGCGA
GCATCTCGTCGATCAGCGCG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MPKRLSPPAVASLDAIDRAIVAALADDARIATSALARQIGLSAPATADRVRRLEAQGVIAGFTVELDPRALGYTLQAIVR
VKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLRTIEHLDGILSKVTERAETSTAIVKSTPVPRRLPPLVEEEE
SRR

Sequences:

>Translated_163_residues
MPKRLSPPAVASLDAIDRAIVAALADDARIATSALARQIGLSAPATADRVRRLEAQGVIAGFTVELDPRALGYTLQAIVR
VKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLRTIEHLDGILSKVTERAETSTAIVKSTPVPRRLPPLVEEEE
SRR
>Mature_162_residues
PKRLSPPAVASLDAIDRAIVAALADDARIATSALARQIGLSAPATADRVRRLEAQGVIAGFTVELDPRALGYTLQAIVRV
KPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLRTIEHLDGILSKVTERAETSTAIVKSTPVPRRLPPLVEEEES
RR

Specific function: Transcriptional regulator with a possible role in regulation of amino acid metabolism. Plays a role in the growth phase transition [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=107, Percent_Identity=35.5140186915888, Blast_Score=67, Evalue=5e-13,
Organism=Escherichia coli, GI1790182, Length=151, Percent_Identity=29.1390728476821, Blast_Score=66, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR000835
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17871; Mature: 17740

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRLSPPAVASLDAIDRAIVAALADDARIATSALARQIGLSAPATADRVRRLEAQGVIA
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
GFTVELDPRALGYTLQAIVRVKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLR
EEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
TIEHLDGILSKVTERAETSTAIVKSTPVPRRLPPLVEEEESRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PKRLSPPAVASLDAIDRAIVAALADDARIATSALARQIGLSAPATADRVRRLEAQGVIA
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEEE
GFTVELDPRALGYTLQAIVRVKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLR
EEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
TIEHLDGILSKVTERAETSTAIVKSTPVPRRLPPLVEEEESRR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9341680 [H]