| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161526091
Identifier: 161526091
GI number: 161526091
Start: 3193917
End: 3196478
Strand: Reverse
Name: 161526091
Synonym: Bmul_2922
Alternate gene names: NA
Gene position: 3196478-3193917 (Counterclockwise)
Preceding gene: 161526092
Following gene: 161526090
Centisome position: 92.69
GC content: 64.6
Gene sequence:
>2562_bases ATGAACGTGACCGAACTGATACAGGCGATTCGCGGCGGGCTGATTCAGCAGGATCGTCTGCTGAAGACCGACATCCCGTC GCTGCCGAGCAACGCGCTCGTGCCGCGCCGCGCAGTAATCCGCGCCGAACTGGGCCGCGATTTCAGCGTCGCGCTCGACT TCGTGTCCGCTGCGAGCGACATCGAGCTCAAGACGCTGATCGCCAAGCCGATCACGCTGTGGATCCAGCAGGCGGACAAG TCGTATCTGCCGATCAACGGATATGTGCATACCGCGCGCCGGCTCGGCGCGGACGGCAGTCTGTCGAGCTATCAGCTGAC GTTCGCGTCGTGGATGCACTTCCTGAAGTTCCGCAGCGACATGCGCTACTGGCAGGACGAGAGCGTCGACGCGATCCTGG CCGACGTGTTCGACGCCCATCCGCAGGCGAAGGGTCGGTATCAGTTTGCGTTATCGAAGCCACTGCCGTCGCGCTCGTAC TGCCGCCAGAGCGAAACCGACTGGAACTTCGTGCATCGGCTGATGGAGGACGAAGGGCTGTTCGGGTTTTGGCGGCACGC GGAAGACGGCAGTGCGCACACGCTTGTCGTGACTGACGATCTGCATGCGGTCGACGCGCTGTCGCCGAACGTCGTCAGGT TCGAGCGGTCAGGCGCGGGCACCGAAACCGCCGGGTTGACGCAGTGGGCCGCGTCGCGGACGCTGCAAAGCTCGCTGCAT ACGACGCGCACGTTCGACTACAAGTCGCCTTCGTCGGCCGCCAGTCCGAACGGCACGTCGCTGCCGACGAAGAGCGGCCA GGGCCATCTGGCGGAGCAGACGGAGATCTACGAATACACCGGCGCGTACACGTATCCGGGCCAGGATCGCGGCGAACAGC TGTCGAAGATTCGTCTTGAGGAATGGGAGTCGCGCGCGAAGCGCTTCTTCGGCGTGGGCGGCGTGCGCGGCATCGATGCG GGCCGGCGCTTCACGCTCGCCGATCATCCCGAGCATGACCGCGATTCGGCGCAGGATCGCGAATTCGCGGCGATCGTCGT GAGCCGGTATGTCGAGAACAATCTGCCGCTTTCGGACGAGGAGGCGCACTTTCCGCACAGTCTGCAGGACGAGCTCGCGC GGGTGAAAGCGGCGTACCGCGATGCTGCGGCATTCGTTGTCGGCCACGACGACGGCTCGGCAGGGTTCTATCTCGTCGAG GTCGAAGCGCAGCGCGCGAGCGTGCCGTACCGAAGCGCGCTCGTGCATCGCAAGCCGGAGATGCAGCTCGAGACGGCGGT CGTCGTCGGTCCGCCGGACGAGGAGGTTTACACCGACGAACTGAACCGGATCAAGGTGATGTTCGTGTGGGATCGGCAAA GCGAAGGCCGCGAGAACGCGTCGTGCTGGGTGCGCGTCGTGCAGTCGGATACCGGCGGCGGTTACGGCGGCGTGCATATT CCGCGCGTCGGCGAGGAAGTGCTGATCGGCTATGTGGGCGGCGACTGCGACCGGCCGATCGCGTTGCACCGTGTGTACAA CGGCGCTACCGCGCCGCAGTGGCACAGCAACGGGATTCTATCGGGCTTCCGGTCGAAGGAGTATGCGGGATCGGGGCACA ACGAGATGGTGCTCGACGACGCGACCGGGCAGAACCGCGCGCGGCTGTTCAGCAGCAGCGCGAATTCGCTGCTGCATCTC GGCTATCTGATCGAGCAGGACGGCAATACGCGCGGCGCGTATCTCGGTTCGGGGTTTGACTTGCGCACGGACGCGTATGG CGCGGTGCGCGCGGGGCAGGGGCTGTATGTGACGACGCATCCGAAGCAGGCCAGCAGCCAGCCGCTCGATGTGTCGGAAG CGCGGCAGCAGCTCGTCAATGCCGAGGGGCTGATCGATTCGATGTCGCAGGTCAGCGAGATGCATCAGGCTGCGGGGCTC GGCGATGGGCACGATGCGCTGAAGCAGTTTGCAGATGCGACGCAGAACAGCGTCGCGGGCGCGACGGCGGGAGGAGGCAG AACCGGTGGTGGCGGGACCGGGAATGCGAATGCGTTCAAGGAGCCGGTGATGTTGTTTGGGAGTCCGGCGGGCGTCGCGT TATCTTCGCAGCAGTCGATACACGTGTCGGTCGACCGGCAGACCAATATCGTCAGCGGCCAGAGCACGTTCATTGCCAGC GGAAAATCGCTGATTGCCGGCATCCGCGATCGCATCAGCCTGTTCGCGCAGAATGCCGGGATGAAGCTGTTTGCCGGTAA GGGGAAGGTCGAGATACAGGCGCATGCGGATAGCGTCGAGGTCACTGCGCAGAAGGTGGTCAAGCTGATGTCGGCAACCG AGCATGTCGACGTGGCCGCCAAGCAGGAGGTCCTGCTGACGTCGGGCGGCGCCTATATCCGGATCAAGGGCGGCAACATC GAGATTCATGCGCCGGGGAAGGTGGATTTCAAGGGCGCGCAGCACCAGTTCAGCGGTCCGGCGAGCATGCCGTATCCGCT GCCCGCGATGCCGGGCGGAACGTGCAAGCAGTGTGTGCTGAATGCGCATAGCGGGCGCGAAGCAATGGTCGAGGCGGATT GA
Upstream 100 bases:
>100_bases TGCTGGGGGTGAGGCCGGACGAGCAGTCGTGAGCGACCGGGCTTTCGACCTGAGAGCGCGGGCCCGGCGGGTTCGCGAGG AACAACAAGAAGGGTGACGT
Downstream 100 bases:
>100_bases TGGACGAGCTTAACGACGTGACCGGTCGGAATGACGCGACTGGCGCAAACGAAACCATCGACGCTGCTCCGAATCCGCGC GAGCCGGAGTGGCCGGCGTT
Product: type VI secretion system Vgr family protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; Rhs-Family Protein; Rhs Element Vgr Family; VGR-Like Protein; VGR-Related Type VI Secretion System Protein; Vgr Related Protein; Rhs Element Vgr Related Protein; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Type VI Secretion System VgrG Family Protein; Rhs Family Protein; VgrG Protein; Rhs Element Vgr-Related Protein; Vgr Protein; VgrG Family T6SS G
Number of amino acids: Translated: 853; Mature: 853
Protein sequence:
>853_residues MNVTELIQAIRGGLIQQDRLLKTDIPSLPSNALVPRRAVIRAELGRDFSVALDFVSAASDIELKTLIAKPITLWIQQADK SYLPINGYVHTARRLGADGSLSSYQLTFASWMHFLKFRSDMRYWQDESVDAILADVFDAHPQAKGRYQFALSKPLPSRSY CRQSETDWNFVHRLMEDEGLFGFWRHAEDGSAHTLVVTDDLHAVDALSPNVVRFERSGAGTETAGLTQWAASRTLQSSLH TTRTFDYKSPSSAASPNGTSLPTKSGQGHLAEQTEIYEYTGAYTYPGQDRGEQLSKIRLEEWESRAKRFFGVGGVRGIDA GRRFTLADHPEHDRDSAQDREFAAIVVSRYVENNLPLSDEEAHFPHSLQDELARVKAAYRDAAAFVVGHDDGSAGFYLVE VEAQRASVPYRSALVHRKPEMQLETAVVVGPPDEEVYTDELNRIKVMFVWDRQSEGRENASCWVRVVQSDTGGGYGGVHI PRVGEEVLIGYVGGDCDRPIALHRVYNGATAPQWHSNGILSGFRSKEYAGSGHNEMVLDDATGQNRARLFSSSANSLLHL GYLIEQDGNTRGAYLGSGFDLRTDAYGAVRAGQGLYVTTHPKQASSQPLDVSEARQQLVNAEGLIDSMSQVSEMHQAAGL GDGHDALKQFADATQNSVAGATAGGGRTGGGGTGNANAFKEPVMLFGSPAGVALSSQQSIHVSVDRQTNIVSGQSTFIAS GKSLIAGIRDRISLFAQNAGMKLFAGKGKVEIQAHADSVEVTAQKVVKLMSATEHVDVAAKQEVLLTSGGAYIRIKGGNI EIHAPGKVDFKGAQHQFSGPASMPYPLPAMPGGTCKQCVLNAHSGREAMVEAD
Sequences:
>Translated_853_residues MNVTELIQAIRGGLIQQDRLLKTDIPSLPSNALVPRRAVIRAELGRDFSVALDFVSAASDIELKTLIAKPITLWIQQADK SYLPINGYVHTARRLGADGSLSSYQLTFASWMHFLKFRSDMRYWQDESVDAILADVFDAHPQAKGRYQFALSKPLPSRSY CRQSETDWNFVHRLMEDEGLFGFWRHAEDGSAHTLVVTDDLHAVDALSPNVVRFERSGAGTETAGLTQWAASRTLQSSLH TTRTFDYKSPSSAASPNGTSLPTKSGQGHLAEQTEIYEYTGAYTYPGQDRGEQLSKIRLEEWESRAKRFFGVGGVRGIDA GRRFTLADHPEHDRDSAQDREFAAIVVSRYVENNLPLSDEEAHFPHSLQDELARVKAAYRDAAAFVVGHDDGSAGFYLVE VEAQRASVPYRSALVHRKPEMQLETAVVVGPPDEEVYTDELNRIKVMFVWDRQSEGRENASCWVRVVQSDTGGGYGGVHI PRVGEEVLIGYVGGDCDRPIALHRVYNGATAPQWHSNGILSGFRSKEYAGSGHNEMVLDDATGQNRARLFSSSANSLLHL GYLIEQDGNTRGAYLGSGFDLRTDAYGAVRAGQGLYVTTHPKQASSQPLDVSEARQQLVNAEGLIDSMSQVSEMHQAAGL GDGHDALKQFADATQNSVAGATAGGGRTGGGGTGNANAFKEPVMLFGSPAGVALSSQQSIHVSVDRQTNIVSGQSTFIAS GKSLIAGIRDRISLFAQNAGMKLFAGKGKVEIQAHADSVEVTAQKVVKLMSATEHVDVAAKQEVLLTSGGAYIRIKGGNI EIHAPGKVDFKGAQHQFSGPASMPYPLPAMPGGTCKQCVLNAHSGREAMVEAD >Mature_853_residues MNVTELIQAIRGGLIQQDRLLKTDIPSLPSNALVPRRAVIRAELGRDFSVALDFVSAASDIELKTLIAKPITLWIQQADK SYLPINGYVHTARRLGADGSLSSYQLTFASWMHFLKFRSDMRYWQDESVDAILADVFDAHPQAKGRYQFALSKPLPSRSY CRQSETDWNFVHRLMEDEGLFGFWRHAEDGSAHTLVVTDDLHAVDALSPNVVRFERSGAGTETAGLTQWAASRTLQSSLH TTRTFDYKSPSSAASPNGTSLPTKSGQGHLAEQTEIYEYTGAYTYPGQDRGEQLSKIRLEEWESRAKRFFGVGGVRGIDA GRRFTLADHPEHDRDSAQDREFAAIVVSRYVENNLPLSDEEAHFPHSLQDELARVKAAYRDAAAFVVGHDDGSAGFYLVE VEAQRASVPYRSALVHRKPEMQLETAVVVGPPDEEVYTDELNRIKVMFVWDRQSEGRENASCWVRVVQSDTGGGYGGVHI PRVGEEVLIGYVGGDCDRPIALHRVYNGATAPQWHSNGILSGFRSKEYAGSGHNEMVLDDATGQNRARLFSSSANSLLHL GYLIEQDGNTRGAYLGSGFDLRTDAYGAVRAGQGLYVTTHPKQASSQPLDVSEARQQLVNAEGLIDSMSQVSEMHQAAGL GDGHDALKQFADATQNSVAGATAGGGRTGGGGTGNANAFKEPVMLFGSPAGVALSSQQSIHVSVDRQTNIVSGQSTFIAS GKSLIAGIRDRISLFAQNAGMKLFAGKGKVEIQAHADSVEVTAQKVVKLMSATEHVDVAAKQEVLLTSGGAYIRIKGGNI EIHAPGKVDFKGAQHQFSGPASMPYPLPAMPGGTCKQCVLNAHSGREAMVEAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92511; Mature: 92511
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTELIQAIRGGLIQQDRLLKTDIPSLPSNALVPRRAVIRAELGRDFSVALDFVSAASD CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC IELKTLIAKPITLWIQQADKSYLPINGYVHTARRLGADGSLSSYQLTFASWMHFLKFRSD CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH MRYWQDESVDAILADVFDAHPQAKGRYQFALSKPLPSRSYCRQSETDWNFVHRLMEDEGL HHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC FGFWRHAEDGSAHTLVVTDDLHAVDALSPNVVRFERSGAGTETAGLTQWAASRTLQSSLH EEEEECCCCCCEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH TTRTFDYKSPSSAASPNGTSLPTKSGQGHLAEQTEIYEYTGAYTYPGQDRGEQLSKIRLE HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHH EWESRAKRFFGVGGVRGIDAGRRFTLADHPEHDRDSAQDREFAAIVVSRYVENNLPLSDE HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC EAHFPHSLQDELARVKAAYRDAAAFVVGHDDGSAGFYLVEVEAQRASVPYRSALVHRKPE CCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHCCCCC MQLETAVVVGPPDEEVYTDELNRIKVMFVWDRQSEGRENASCWVRVVQSDTGGGYGGVHI CEEEEEEEECCCCCCHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEC PRVGEEVLIGYVGGDCDRPIALHRVYNGATAPQWHSNGILSGFRSKEYAGSGHNEMVLDD CCCCCEEEEEEECCCCCCCEEEHEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEC ATGQNRARLFSSSANSLLHLGYLIEQDGNTRGAYLGSGFDLRTDAYGAVRAGQGLYVTTH CCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCEEECCCCEECCCCCCCEECCCEEEEEEC PKQASSQPLDVSEARQQLVNAEGLIDSMSQVSEMHQAAGLGDGHDALKQFADATQNSVAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC ATAGGGRTGGGGTGNANAFKEPVMLFGSPAGVALSSQQSIHVSVDRQTNIVSGQSTFIAS CCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCEECCCCEEEEEECCCCEEECCCCEEEEC GKSLIAGIRDRISLFAQNAGMKLFAGKGKVEIQAHADSVEVTAQKVVKLMSATEHVDVAA CHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC KQEVLLTSGGAYIRIKGGNIEIHAPGKVDFKGAQHQFSGPASMPYPLPAMPGGTCKQCVL CCEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH NAHSGREAMVEAD CCCCCCCEEEECC >Mature Secondary Structure MNVTELIQAIRGGLIQQDRLLKTDIPSLPSNALVPRRAVIRAELGRDFSVALDFVSAASD CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCC IELKTLIAKPITLWIQQADKSYLPINGYVHTARRLGADGSLSSYQLTFASWMHFLKFRSD CCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHH MRYWQDESVDAILADVFDAHPQAKGRYQFALSKPLPSRSYCRQSETDWNFVHRLMEDEGL HHHCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCC FGFWRHAEDGSAHTLVVTDDLHAVDALSPNVVRFERSGAGTETAGLTQWAASRTLQSSLH EEEEECCCCCCEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH TTRTFDYKSPSSAASPNGTSLPTKSGQGHLAEQTEIYEYTGAYTYPGQDRGEQLSKIRLE HHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCHHHHHHHHHHH EWESRAKRFFGVGGVRGIDAGRRFTLADHPEHDRDSAQDREFAAIVVSRYVENNLPLSDE HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC EAHFPHSLQDELARVKAAYRDAAAFVVGHDDGSAGFYLVEVEAQRASVPYRSALVHRKPE CCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHCCCCC MQLETAVVVGPPDEEVYTDELNRIKVMFVWDRQSEGRENASCWVRVVQSDTGGGYGGVHI CEEEEEEEECCCCCCHHHCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCEEC PRVGEEVLIGYVGGDCDRPIALHRVYNGATAPQWHSNGILSGFRSKEYAGSGHNEMVLDD CCCCCEEEEEEECCCCCCCEEEHEECCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEC ATGQNRARLFSSSANSLLHLGYLIEQDGNTRGAYLGSGFDLRTDAYGAVRAGQGLYVTTH CCCCCHHHHHHCCCCCEEEEEEEEECCCCCCCEEECCCCEECCCCCCCEECCCEEEEEEC PKQASSQPLDVSEARQQLVNAEGLIDSMSQVSEMHQAAGLGDGHDALKQFADATQNSVAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC ATAGGGRTGGGGTGNANAFKEPVMLFGSPAGVALSSQQSIHVSVDRQTNIVSGQSTFIAS CCCCCCCCCCCCCCCCCHHCCCEEEECCCCCCEECCCCEEEEEECCCCEEECCCCEEEEC GKSLIAGIRDRISLFAQNAGMKLFAGKGKVEIQAHADSVEVTAQKVVKLMSATEHVDVAA CHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHC KQEVLLTSGGAYIRIKGGNIEIHAPGKVDFKGAQHQFSGPASMPYPLPAMPGGTCKQCVL CCEEEEECCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH NAHSGREAMVEAD CCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA