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The map label for this gene is ompA [H]

Identifier: 161526078

GI number: 161526078

Start: 3178695

End: 3179645

Strand: Direct

Name: ompA [H]

Synonym: Bmul_2909

Alternate gene names: 161526078

Gene position: 3178695-3179645 (Clockwise)

Preceding gene: 161526077

Following gene: 161526101

Centisome position: 92.18

GC content: 69.19

Gene sequence:

>951_bases
ATGCAACGGACGAATCACGCACTGCGCGCGCGCCGCTGCGCTGTCGTCGCCGCGCTGGTCGCGGCCGGCTTCGTCGCCAG
CGGTGCGGCATACGCGCAGAACGCCGGCGGCGCGACCGTCACGCCGGTCGGCAACGGCACCGTCGCGGCGAGTGCGCTGC
CGGCGAATGCCGGCGCCGGTTCGGCGAGCGCGGCCGCATCCGCCACGCTCGTGCGCGGCACGGCCGGCACGCTCGCGCCG
CCGCCCGCGAATGCGGCGCCCGGCCAGGTGGTCGTCGGCGGCAAGGTGCCCGACGAGGCGACCAAGGCCGCCGTGCTGCA
GAAGCTGCGCGACACGTACGGCGCCGCGAACGTCGTCGATCAGATCGAGGTCGGCGACGTCGCGACGCCGCCCAACTGGA
GCGCGAACGTGCAGAAGCTGCTCGGTACGCAGCTCAAGCAGATCAGCAAGGGGCAGCTGAAGATCAACGGCACGCAGATC
GAGATGAAGGGCGAGGTGCACAACGAGGCGCAGCGCCAGCAGATCGCGAGCGACATGGCCAATACGCTGAACCCGACGTA
TACGATCAAGAACGGGCTGCGCGTGTCGGCGTCCGAGCAGGGGCTGCTCGATCAGACGCTCGCGAACCGGACGATCGAGT
TCGAGACCGGCAGCGCGACGCTGACGCCGCAGGGCAAGCAGATTCTCGACCAGATGGCGGCCGCGCTCGCGAAGCTGCAG
AACCGGACCGTCGACATCATCGGGCATACCGACAACTCGGGGAATCGAACGTCGAACATCGCGCTGAGCCAGGCTCGGGC
GGATGCGGTGAAGGGATATCTGATCACGAAAGGGATCGCGCCGCAGCAGATGACGACGACGGGAGTCGGGCCGGATCAGC
CGATCGCGCCGAATGATACGGCCGAGGGGCGGGCGAGGAATCGGCGGATCGAGTTCAGGGTGGGGCAGTAG

Upstream 100 bases:

>100_bases
CCGCAGGTCAGCAAACTCGTCAGCTATCTCGATCAACCGCAACTCTCGCTGCGCGTCGCCATCGACGCGTTCCGCGAAGC
GTTCATCGGAGGCTGACGCG

Downstream 100 bases:

>100_bases
GTGGGGAGACGGGGGCGTTTGATCAAATTCGAAACGGGCCGCGTCATTGATGCGGCCCGAGCACGCCTACGACGGCAGCC
TTCTTCATGTTCTCCAGCAC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MQRTNHALRARRCAVVAALVAAGFVASGAAYAQNAGGATVTPVGNGTVAASALPANAGAGSASAAASATLVRGTAGTLAP
PPANAAPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNWSANVQKLLGTQLKQISKGQLKINGTQI
EMKGEVHNEAQRQQIASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKQILDQMAAALAKLQ
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKGIAPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRVGQ

Sequences:

>Translated_316_residues
MQRTNHALRARRCAVVAALVAAGFVASGAAYAQNAGGATVTPVGNGTVAASALPANAGAGSASAAASATLVRGTAGTLAP
PPANAAPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNWSANVQKLLGTQLKQISKGQLKINGTQI
EMKGEVHNEAQRQQIASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKQILDQMAAALAKLQ
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKGIAPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRVGQ
>Mature_316_residues
MQRTNHALRARRCAVVAALVAAGFVASGAAYAQNAGGATVTPVGNGTVAASALPANAGAGSASAAASATLVRGTAGTLAP
PPANAAPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVDQIEVGDVATPPNWSANVQKLLGTQLKQISKGQLKINGTQI
EMKGEVHNEAQRQQIASDMANTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKQILDQMAAALAKLQ
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKGIAPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRVGQ

Specific function: Structural protein that may protect the integrity of the bacterium [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=101, Percent_Identity=44.5544554455446, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1788957, Length=100, Percent_Identity=40, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787191, Length=114, Percent_Identity=34.2105263157895, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 32500; Mature: 32500

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTNHALRARRCAVVAALVAAGFVASGAAYAQNAGGATVTPVGNGTVAASALPANAGAG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCC
SASAAASATLVRGTAGTLAPPPANAAPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVD
CCHHHHHHEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHH
QIEVGDVATPPNWSANVQKLLGTQLKQISKGQLKINGTQIEMKGEVHNEAQRQQIASDMA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEECCCHHHHHHHHHHHHHHH
NTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKQILDQMAAALAKLQ
HHCCCCEEECCCEEECCCCCCHHHHHHHCCEEEEECCCEEECCCHHHHHHHHHHHHHHHC
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKGIAPQQMTTTGVGPDQPIAPNDT
CCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEECCCCCCCEEECCCCCCCCCCCCCC
AEGRARNRRIEFRVGQ
CCCHHHCCEEEEEECC
>Mature Secondary Structure
MQRTNHALRARRCAVVAALVAAGFVASGAAYAQNAGGATVTPVGNGTVAASALPANAGAG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEECCCCEEEEECCCCCCCCC
SASAAASATLVRGTAGTLAPPPANAAPGQVVVGGKVPDEATKAAVLQKLRDTYGAANVVD
CCHHHHHHEEEECCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHH
QIEVGDVATPPNWSANVQKLLGTQLKQISKGQLKINGTQIEMKGEVHNEAQRQQIASDMA
HCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCEEEEECCCHHHHHHHHHHHHHHH
NTLNPTYTIKNGLRVSASEQGLLDQTLANRTIEFETGSATLTPQGKQILDQMAAALAKLQ
HHCCCCEEECCCEEECCCCCCHHHHHHHCCEEEEECCCEEECCCHHHHHHHHHHHHHHHC
NRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKGIAPQQMTTTGVGPDQPIAPNDT
CCEEEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEECCCCCCCEEECCCCCCCCCCCCCC
AEGRARNRRIEFRVGQ
CCCHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1447140 [H]