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The map label for this gene is visC [H]

Identifier: 161526038

GI number: 161526038

Start: 3133591

End: 3134769

Strand: Reverse

Name: visC [H]

Synonym: Bmul_2869

Alternate gene names: 161526038

Gene position: 3134769-3133591 (Counterclockwise)

Preceding gene: 161526039

Following gene: 161526037

Centisome position: 90.9

GC content: 70.82

Gene sequence:

>1179_bases
ATGCCCGCCATGACTGTCCACCATACCTTCGACGTCGCCGTGGTCGGCGGCGGGCTCGTCGGCAAGACGGCCGCGCTCGC
GCTGACCCAGTCCGGCTACAAGACCGCGCTGCTCGCGCAGCCGGTCACGCCGCGCCCGGCCGATCTCGCGTTCGATACGC
GCGTGTATGCGCTGTCGTCCAGCTCGCAGGCGCTGCTCGAGCGGCTGCGCGTCTGGCAGGCGCTCGATCACGGCCGGCTC
GCGCCCGTCTATGACATGCGCGTGTACGGCGATGCGCACGCCGAGCTGCATTTTTCCGCCTATCAGGCGTCGGTGCCGCA
GCTCGCCTGGATCGCCGAGTCGTCGTTGATCGAGACGTCGCTCGACGCCGCGCTGCGTTTCCAGCCGAACCTGACCTGGT
TCGACGCGCGCGCGCAGGGCCTCGACGTGCGCGACGACGCGGCCGTGCTCGCGTTGTCGTCGGGGCAGGTGCTCGAAGCC
GATCTCGTCGTGGGCGCGGACGGCGCACACTCGTGGGTACGTTCGCAGATGGGCGCGCGCGTCGAGCGGCGCGATTACCG
GCAGACGGGCGTCGTTGCGAATTTCAAGGCGTCGCTGCCGCACCGCGAAACCGCGTATCAGTGGTTTCGCGACGGCGAGA
TCGTCGCGCTGCTGCCGCTGCCCGACGGCCACGTGTCGCTCGTGTGGTCCGCGCACACCGCGCATGCGGACGAGCTGCTT
GCGCTGGACCCCGCGCAGCTCGCGGCCGAAGTCGAGCGCGTGTCGCACGCGCAGGTCGGCACGCTCGAATGCGTGACGCC
GGCCGCCGGTTTCCCGCTCGCGCTGCAGACGGTCGACAAGCTGATCGCGCCGCGCGTCGCGCTCGTCGGCGATGCCGCGC
ATCTGATCCATCCGCTCGCGGGGCAGGGGATGAACCTCGGCCTGCGCGACGTCGCCGCGCTCGCCGACGCGATCGCGAAC
AAGGAAAGCTTCCGCAACCTCGGCGATACGGTGCTGCTGCGCCGCTACGAGCGTTCGCGCCGCGAGGACATCCGCGCGCT
GATGGTCGCGACCGATGGCCTGCAGCGGCTGTTCGCCGTGCCCGGTTCGTTCGCGAAGGCCGTGCGCAATGCGGGCATGG
CGTTCGTCGGCGCGCAGCCGCTCGTGAAGCGCTGGCTGGTATCCGCCGCGCTCGGTTGA

Upstream 100 bases:

>100_bases
CGACCGCCCACATGCGGCGCCCTGTCACCCCGCCGCGCGCCGCGATTCCGCTGATTTCCCGCAAAGTCCGGCCGCGTAAG
GGTTTGGCCCCGCGGCTATA

Downstream 100 bases:

>100_bases
GCGAACCTTCGGCCGCATCGCCGGTCGGACTCGGTTCCGTTACGGCGTACACTGTGCCGTGCATTCCGATAGAGCTGAAG
GAACAACTCGATGAAAAAAA

Product: ubiquinone biosynthesis hydroxylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MPAMTVHHTFDVAVVGGGLVGKTAALALTQSGYKTALLAQPVTPRPADLAFDTRVYALSSSSQALLERLRVWQALDHGRL
APVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLIETSLDAALRFQPNLTWFDARAQGLDVRDDAAVLALSSGQVLEA
DLVVGADGAHSWVRSQMGARVERRDYRQTGVVANFKASLPHRETAYQWFRDGEIVALLPLPDGHVSLVWSAHTAHADELL
ALDPAQLAAEVERVSHAQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADAIAN
KESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAVPGSFAKAVRNAGMAFVGAQPLVKRWLVSAALG

Sequences:

>Translated_392_residues
MPAMTVHHTFDVAVVGGGLVGKTAALALTQSGYKTALLAQPVTPRPADLAFDTRVYALSSSSQALLERLRVWQALDHGRL
APVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLIETSLDAALRFQPNLTWFDARAQGLDVRDDAAVLALSSGQVLEA
DLVVGADGAHSWVRSQMGARVERRDYRQTGVVANFKASLPHRETAYQWFRDGEIVALLPLPDGHVSLVWSAHTAHADELL
ALDPAQLAAEVERVSHAQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADAIAN
KESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAVPGSFAKAVRNAGMAFVGAQPLVKRWLVSAALG
>Mature_391_residues
PAMTVHHTFDVAVVGGGLVGKTAALALTQSGYKTALLAQPVTPRPADLAFDTRVYALSSSSQALLERLRVWQALDHGRLA
PVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLIETSLDAALRFQPNLTWFDARAQGLDVRDDAAVLALSSGQVLEAD
LVVGADGAHSWVRSQMGARVERRDYRQTGVVANFKASLPHRETAYQWFRDGEIVALLPLPDGHVSLVWSAHTAHADELLA
LDPAQLAAEVERVSHAQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLAGQGMNLGLRDVAALADAIANK
ESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAVPGSFAKAVRNAGMAFVGAQPLVKRWLVSAALG

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Homo sapiens, GI32967305, Length=385, Percent_Identity=26.7532467532467, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI32967307, Length=276, Percent_Identity=30.4347826086957, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI1789273, Length=390, Percent_Identity=32.8205128205128, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1786883, Length=391, Percent_Identity=34.2710997442455, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1789274, Length=370, Percent_Identity=31.3513513513514, Blast_Score=154, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI25146631, Length=434, Percent_Identity=29.0322580645161, Blast_Score=137, Evalue=9e-33,
Organism=Saccharomyces cerevisiae, GI6321694, Length=462, Percent_Identity=25.974025974026, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI19920760, Length=438, Percent_Identity=30.1369863013699, Blast_Score=139, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42206; Mature: 42074

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS01304 UBIH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMTVHHTFDVAVVGGGLVGKTAALALTQSGYKTALLAQPVTPRPADLAFDTRVYALSS
CCCEEEEEEEEEEEECCCCHHHHHHEEEECCCCCEEEEECCCCCCCCCCEECCEEEEECC
SSQALLERLRVWQALDHGRLAPVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLIETS
CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEHHHHCCCCCCHHHHHHHHHHHH
LDAALRFQPNLTWFDARAQGLDVRDDAAVLALSSGQVLEADLVVGADGAHSWVRSQMGAR
HHHHEEECCCCEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCH
VERRDYRQTGVVANFKASLPHRETAYQWFRDGEIVALLPLPDGHVSLVWSAHTAHADELL
HHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCEE
ALDPAQLAAEVERVSHAQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLA
EECHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHC
GQGMNLGLRDVAALADAIANKESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAV
CCCCCCCHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGSFAKAVRNAGMAFVGAQPLVKRWLVSAALG
CCHHHHHHHHCCEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAMTVHHTFDVAVVGGGLVGKTAALALTQSGYKTALLAQPVTPRPADLAFDTRVYALSS
CCEEEEEEEEEEEECCCCHHHHHHEEEECCCCCEEEEECCCCCCCCCCEECCEEEEECC
SSQALLERLRVWQALDHGRLAPVYDMRVYGDAHAELHFSAYQASVPQLAWIAESSLIETS
CHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEHHHHCCCCCCHHHHHHHHHHHH
LDAALRFQPNLTWFDARAQGLDVRDDAAVLALSSGQVLEADLVVGADGAHSWVRSQMGAR
HHHHEEECCCCEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEEECCCHHHHHHHHHCCH
VERRDYRQTGVVANFKASLPHRETAYQWFRDGEIVALLPLPDGHVSLVWSAHTAHADELL
HHHHHHHHHCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCEE
ALDPAQLAAEVERVSHAQVGTLECVTPAAGFPLALQTVDKLIAPRVALVGDAAHLIHPLA
EECHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHEECCHHHHHHHHC
GQGMNLGLRDVAALADAIANKESFRNLGDTVLLRRYERSRREDIRALMVATDGLQRLFAV
CCCCCCCHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGSFAKAVRNAGMAFVGAQPLVKRWLVSAALG
CCHHHHHHHHCCEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on paired donors, with incorporation or reduction of molecular oxygen; With NADH2 or NADPH2 as one donor, and incorporation of one atom of oxygen [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]