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The map label for this gene is ypjD [C]

Identifier: 161525961

GI number: 161525961

Start: 3045676

End: 3046572

Strand: Reverse

Name: ypjD [C]

Synonym: Bmul_2792

Alternate gene names: 161525961

Gene position: 3046572-3045676 (Counterclockwise)

Preceding gene: 161525964

Following gene: 161525960

Centisome position: 88.35

GC content: 68.78

Gene sequence:

>897_bases
ATGGATATTGTACTGTATGCCCTCACCGCATTCCTGTACGGCGGCCTTGCCGTCGCAGGCTGGCGCACGCATCGGCAGGG
CGCGGCGTCGCCGCTCGTCGCGAGCGTGCCGGCCGTGCCCGTTCCGGCGTCGGCCGCGTCCGGGGTGAGCGGCGTCGGGC
GCGCGCTGCTGTTCGCCGCGCTCGTCGCGCACGGCGTGCTGCTGCACATGACGATCTTCCCGCACGACGCGATGATCTTC
GGTTTCGCGTTCGCGCTGTCCGCGATGTTCTGGCTCGGCGCCGGCATCTACTGGATCGAGAGCTTCTTCTTCCCGCTCGA
CAGCCTGCGTCTGCTCGTGCTGCCGCTCGCCTGCGGCGCATCGCTGCTGCCGCTCGTGTTCGGCGGCGTGCGGGTGCTGC
CTTATGCCGCAGCACCGCTGTTCAAGCTGCACTTCCTGATCGCGAACATCGCGTACGGACTGTTCGCGATCGCGGCGCTG
CACGCGGTGCTGATGCTGATGGTCGAGCGGCGCCTGCAGTCGCTGCGAAGCGGCGGGCGCGACGGCTCGACCGGCTGGAT
CGCGAGTTGGCTCGAAACGCTGCCGCCGCTGCTCACGCTCGAGAAGCTGCTGTTCCGCCTGATCGGCGCCGGCTTTGTGC
TGCTCACGCTGACGCTCGCGTCGGGCATCCTGTTCAGCGAGCAGGTCGATGCGCGCGCATTGCGCCTCGATCACAAGACG
GTGTTCGCGATCCTGTCGTGGCTGATGTTCGGCGGCCTGCTGATCGCGCGCAAGACGTCCGGCTGGCGCGGGCGCGGCGC
GGCGCGCTGGGTGCTCGTGTCGTTCGGCGCGCTGCTGCTCGCGTATGTCGGCAGCCGGTTCGTTTTCGAGGTGCTGCTGC
ACCGCTCCGTCGTTTGA

Upstream 100 bases:

>100_bases
TTGTCGAGCATGGGGAGCGATGGACAGTGGGGCCCGAAGGCGCGGCGGTCATCGAACAACGGAGCCGTCGCGGGAAGGGG
GCCTAGTGTAAACTTCGAAC

Downstream 100 bases:

>100_bases
CCGCAGGTTTCCGATGCGACAGATTCTTCTCCTGATTCTTCTCTTCTTCGCCGGTTCGTGGCTCGCGCGCAAGCTGCGTC
ACGCGCAGGAGCAGGCGCGC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MDIVLYALTAFLYGGLAVAGWRTHRQGAASPLVASVPAVPVPASAASGVSGVGRALLFAALVAHGVLLHMTIFPHDAMIF
GFAFALSAMFWLGAGIYWIESFFFPLDSLRLLVLPLACGASLLPLVFGGVRVLPYAAAPLFKLHFLIANIAYGLFAIAAL
HAVLMLMVERRLQSLRSGGRDGSTGWIASWLETLPPLLTLEKLLFRLIGAGFVLLTLTLASGILFSEQVDARALRLDHKT
VFAILSWLMFGGLLIARKTSGWRGRGAARWVLVSFGALLLAYVGSRFVFEVLLHRSVV

Sequences:

>Translated_298_residues
MDIVLYALTAFLYGGLAVAGWRTHRQGAASPLVASVPAVPVPASAASGVSGVGRALLFAALVAHGVLLHMTIFPHDAMIF
GFAFALSAMFWLGAGIYWIESFFFPLDSLRLLVLPLACGASLLPLVFGGVRVLPYAAAPLFKLHFLIANIAYGLFAIAAL
HAVLMLMVERRLQSLRSGGRDGSTGWIASWLETLPPLLTLEKLLFRLIGAGFVLLTLTLASGILFSEQVDARALRLDHKT
VFAILSWLMFGGLLIARKTSGWRGRGAARWVLVSFGALLLAYVGSRFVFEVLLHRSVV
>Mature_298_residues
MDIVLYALTAFLYGGLAVAGWRTHRQGAASPLVASVPAVPVPASAASGVSGVGRALLFAALVAHGVLLHMTIFPHDAMIF
GFAFALSAMFWLGAGIYWIESFFFPLDSLRLLVLPLACGASLLPLVFGGVRVLPYAAAPLFKLHFLIANIAYGLFAIAAL
HAVLMLMVERRLQSLRSGGRDGSTGWIASWLETLPPLLTLEKLLFRLIGAGFVLLTLTLASGILFSEQVDARALRLDHKT
VFAILSWLMFGGLLIARKTSGWRGRGAARWVLVSFGALLLAYVGSRFVFEVLLHRSVV

Specific function: Unknown

COG id: COG4137

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 32075; Mature: 32075

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIVLYALTAFLYGGLAVAGWRTHRQGAASPLVASVPAVPVPASAASGVSGVGRALLFAA
CHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCHHHHHHHHHHHH
LVAHGVLLHMTIFPHDAMIFGFAFALSAMFWLGAGIYWIESFFFPLDSLRLLVLPLACGA
HHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCH
SLLPLVFGGVRVLPYAAAPLFKLHFLIANIAYGLFAIAALHAVLMLMVERRLQSLRSGGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGSTGWIASWLETLPPLLTLEKLLFRLIGAGFVLLTLTLASGILFSEQVDARALRLDHKT
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAILSWLMFGGLLIARKTSGWRGRGAARWVLVSFGALLLAYVGSRFVFEVLLHRSVV
HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIVLYALTAFLYGGLAVAGWRTHRQGAASPLVASVPAVPVPASAASGVSGVGRALLFAA
CHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCHHHHHHHHHHHH
LVAHGVLLHMTIFPHDAMIFGFAFALSAMFWLGAGIYWIESFFFPLDSLRLLVLPLACGA
HHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCH
SLLPLVFGGVRVLPYAAAPLFKLHFLIANIAYGLFAIAALHAVLMLMVERRLQSLRSGGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGSTGWIASWLETLPPLLTLEKLLFRLIGAGFVLLTLTLASGILFSEQVDARALRLDHKT
CCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFAILSWLMFGGLLIARKTSGWRGRGAARWVLVSFGALLLAYVGSRFVFEVLLHRSVV
HHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7553451 [H]