| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is maeB [H]
Identifier: 161525923
GI number: 161525923
Start: 3005456
End: 3007798
Strand: Reverse
Name: maeB [H]
Synonym: Bmul_2754
Alternate gene names: 161525923
Gene position: 3007798-3005456 (Counterclockwise)
Preceding gene: 161525927
Following gene: 161525922
Centisome position: 87.22
GC content: 65.56
Gene sequence:
>2343_bases ATGCCGTCGAACAGTCATTCTAATCCGCACGTCACGAGACACATGTCCACCCAAGCCTCCTCCAAAGCCAAGCTCCGCGA AGCCGCCCTCGACTACCACGAATTCCCGACGCCGGGCAAAGTCGCCATCGCCCCGACCAAGCAGATGATCAACCAGCGCG ACCTTGCGCTCGCGTATTCGCCGGGCGTTGCGTTCGCATGCGAGGAGATCGTCGAGAATCCGCTGAATGCCGCGCGCTTC ACCGCGCGCAGCAACCTCGTCGGCGTCGTCACCAACGGTACCGCGGTGCTCGGGCTCGGCAACATCGGCCCGCTCGCGTC GAAGCCGGTGATGGAAGGCAAGGCCGTGCTGTTCAAGAAGTTCGCCGGCATCGACGTGTTCGACATCGAGCTGAACGAGT CCGATCCGCACAAGCTGGTCGACGTGATCGCCGCGCTCGAGCCGACCTTCGGCGGCATCAACCTCGAGGACATCAAGGCG CCCGACTGCTTCATCGTCGAGCGCGAAGCGCGCAAGCGCATGAAGATTCCGGTGTTCCACGACGACCAGCACGGCACCGC GATCGTCGTGGCCGCCGCCGTCACGAACGGGCTGAAGGTCGTCGGCAAGGACATCAAGAAGGTCAAGCTCGTCGCGTCGG GCGCCGGCGCCGCCGCACTCGCGTGTCTCGATCTGCTCGTCGACATCGGCCTGCCGATCGAGAACATCACGGTGACCGAC CTTGCCGGCGTCGTCTACAAGGGCCGTACCGAGCTGATGGATCCGGACAAGGAGCGCTTCGCGCGCGAAACCGACGCGCG CACGCTCGCCGAAGTGATCGACGGCGCGGACATCTTCCTCGGCCTGTCGGCTGCCGGCGTGCTGAAGCAGGAGATGGTGA AGGGGATGGCCGAGCGCCCGCTGATTCTCGCGCTCGCGAACCCGACGCCGGAAATCCTGCCGGAAGTCGCGCTCGAAGTG CGCCCCGACGCGGTGCTCGCGACGGGCCGCACCGACTATCCGAACCAGGTCAACAACGTGCTCTGCTTCCCGTTCATCTT CCGCGGCGCGCTCGACGTCGGCGCGACGACGATCACGCGGGAAATGGAGATCGCGGCCGTCAACGCGATCGCGGAACTCG CGCAGCAGGAGCAGAGCGACATCGTCGCGACCGCGTACGGGATCCAGGATCTGTCGTTCGGGCCCGAATACCTGATTCCG AAGCCGTTCGATCCGCGCCTGATCGTGAAGATCGCGCCGGCCGTCGCGCAGGCCGCGATGGACGGCGGCGTCGCGACGCG TCCGATCGAGGACATGGAAGCGTACAAGCAGCATCTGCAGCAGTTCGTCTATCACAGCGGTACGACGATGAAGCCGATCT TCCAGATCGCGCGTGCGGCGCCGGAAGAGAAGAAGCGCGTCGTGTTCGCGGAAGGCGAAGAAGAGCGCGTGTTGCGTGCC GTTCAGATCATCGTCGACGAAAAACTGGCGAAGCCGATCCTGATCGGCCGCCCGGCCGTGATCGAACACCGCATCCAGCG CTACGGCCTGCGTCTGACGCCGGGCACCGACTTCACGGTCGTGAACACCGAGCACGACGAGCGCTACCGCGACTTCTGGC AGACGTACTACAAGATGATGGCGCGCAAGGGCATCAGCGAACAGCTCGCGCGCGTCGAAATGCGCCGCCGCACGACGCTG ATCGGCTCGATGCTCGTGAAGAAGGGCGAGGCGGACGGGATGATCTGCGGCACGATCAGCACGACGCACCGTCATCTGCA CTTCATCGACCAGGTGATCGGCAAGCGGCCCGGCTGCAGCGTCTACGCGGCGATGAACGGCCTCGTGCTGCCCGGCCGCC AGATCTTCCTCGTCGATACGCACGTGAACGTCGACCCGACGCCCGAGCAGCTCGCCGAGATCACGATCATGGCCGCGGAA GAAGTGCGCCGCTTCGGCATCGAGCCGAAGGTCGCGCTGCTGTCGCACTCGAACTTCGGCACGAGCAACGCGCCGTCCGC ACAGAAGATGCGCGATACGCTCGCGATCCTGAAGGAACGTGCGCCGGACCTGACGGTCGACGGCGAAATGCACGGCGATG TGGCGCTCGACGCGGCGCTGCGCAAGGAAATCCTGCCGGAATCGACGCTCGAAGGCGACGCGAACCTGCTGGTGCTGCCG AACATCGACGCAGCGAACATCGCGTACAACCTGCTGAAGACGGCGGCCGGCAACAACATCGCGATCGGCCCGATCCTGCT CGGCGCCGCGCAGCCGGTGCACGTGCTGACCGAATCGGCGACCGTGCGCCGGATCGTGAACATGGCGGCGCTGCTCGTCG CCGATGTGAACGCCGCGCGCTGA
Upstream 100 bases:
>100_bases GTACGGGGCGAACGGCAGCGGTTCCTGCACCGTTCAGTACATTTTTGTCGCGGCTGTTGCACCCGAATCGACGGTCAGAG GGCGGTCGATTGGCGCTACA
Downstream 100 bases:
>100_bases GCGCACACGCGCGGTGCCGGGCAGACCGGTGCCGCGCGGCAGGCGAAAACGTCAACAATCGAAAAAAAGGCGTGCCCGCA ACGGGCACGCCGCCGGGCAT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 780; Mature: 779
Protein sequence:
>780_residues MPSNSHSNPHVTRHMSTQASSKAKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARF TARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKA PDCFIVEREARKRMKIPVFHDDQHGTAIVVAAAVTNGLKVVGKDIKKVKLVASGAGAAALACLDLLVDIGLPIENITVTD LAGVVYKGRTELMDPDKERFARETDARTLAEVIDGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILPEVALEV RPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIP KPFDPRLIVKIAPAVAQAAMDGGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQIARAAPEEKKRVVFAEGEEERVLRA VQIIVDEKLAKPILIGRPAVIEHRIQRYGLRLTPGTDFTVVNTEHDERYRDFWQTYYKMMARKGISEQLARVEMRRRTTL IGSMLVKKGEADGMICGTISTTHRHLHFIDQVIGKRPGCSVYAAMNGLVLPGRQIFLVDTHVNVDPTPEQLAEITIMAAE EVRRFGIEPKVALLSHSNFGTSNAPSAQKMRDTLAILKERAPDLTVDGEMHGDVALDAALRKEILPESTLEGDANLLVLP NIDAANIAYNLLKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMAALLVADVNAAR
Sequences:
>Translated_780_residues MPSNSHSNPHVTRHMSTQASSKAKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARF TARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKA PDCFIVEREARKRMKIPVFHDDQHGTAIVVAAAVTNGLKVVGKDIKKVKLVASGAGAAALACLDLLVDIGLPIENITVTD LAGVVYKGRTELMDPDKERFARETDARTLAEVIDGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILPEVALEV RPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIP KPFDPRLIVKIAPAVAQAAMDGGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQIARAAPEEKKRVVFAEGEEERVLRA VQIIVDEKLAKPILIGRPAVIEHRIQRYGLRLTPGTDFTVVNTEHDERYRDFWQTYYKMMARKGISEQLARVEMRRRTTL IGSMLVKKGEADGMICGTISTTHRHLHFIDQVIGKRPGCSVYAAMNGLVLPGRQIFLVDTHVNVDPTPEQLAEITIMAAE EVRRFGIEPKVALLSHSNFGTSNAPSAQKMRDTLAILKERAPDLTVDGEMHGDVALDAALRKEILPESTLEGDANLLVLP NIDAANIAYNLLKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMAALLVADVNAAR >Mature_779_residues PSNSHSNPHVTRHMSTQASSKAKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFT ARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAP DCFIVEREARKRMKIPVFHDDQHGTAIVVAAAVTNGLKVVGKDIKKVKLVASGAGAAALACLDLLVDIGLPIENITVTDL AGVVYKGRTELMDPDKERFARETDARTLAEVIDGADIFLGLSAAGVLKQEMVKGMAERPLILALANPTPEILPEVALEVR PDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIPK PFDPRLIVKIAPAVAQAAMDGGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQIARAAPEEKKRVVFAEGEEERVLRAV QIIVDEKLAKPILIGRPAVIEHRIQRYGLRLTPGTDFTVVNTEHDERYRDFWQTYYKMMARKGISEQLARVEMRRRTTLI GSMLVKKGEADGMICGTISTTHRHLHFIDQVIGKRPGCSVYAAMNGLVLPGRQIFLVDTHVNVDPTPEQLAEITIMAAEE VRRFGIEPKVALLSHSNFGTSNAPSAQKMRDTLAILKERAPDLTVDGEMHGDVALDAALRKEILPESTLEGDANLLVLPN IDAANIAYNLLKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMAALLVADVNAAR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI62420882, Length=352, Percent_Identity=28.4090909090909, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI62420880, Length=352, Percent_Identity=28.4090909090909, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI239049447, Length=352, Percent_Identity=28.4090909090909, Blast_Score=84, Evalue=6e-16, Organism=Homo sapiens, GI4505143, Length=343, Percent_Identity=26.530612244898, Blast_Score=84, Evalue=7e-16, Organism=Homo sapiens, GI4505145, Length=368, Percent_Identity=26.9021739130435, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI270265879, Length=368, Percent_Identity=27.7173913043478, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1788806, Length=753, Percent_Identity=61.7529880478088, Blast_Score=968, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=322, Percent_Identity=33.2298136645963, Blast_Score=163, Evalue=3e-41, Organism=Escherichia coli, GI1788800, Length=315, Percent_Identity=32.0634920634921, Blast_Score=150, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17537199, Length=474, Percent_Identity=25.5274261603376, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356279, Length=476, Percent_Identity=26.0504201680672, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI281362672, Length=476, Percent_Identity=26.0504201680672, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI281362674, Length=476, Percent_Identity=26.0504201680672, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI78707242, Length=408, Percent_Identity=25.9803921568627, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI78707238, Length=408, Percent_Identity=25.9803921568627, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI78707240, Length=349, Percent_Identity=26.3610315186246, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646386, Length=350, Percent_Identity=27.1428571428571, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24646388, Length=350, Percent_Identity=27.1428571428571, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 84618; Mature: 84487
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNSHSNPHVTRHMSTQASSKAKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYS CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEEC PGVAFACEEIVENPLNAARFTARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKK CCHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHH FAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVEREARKRMKIPVFH HCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHCCCCCCEEE DDQHGTAIVVAAAVTNGLKVVGKDIKKVKLVASGAGAAALACLDLLVDIGLPIENITVTD CCCCCCEEEEEEHHHCCHHHHCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEHHH LAGVVYKGRTELMDPDKERFARETDARTLAEVIDGADIFLGLSAAGVLKQEMVKGMAERP HHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC LILALANPTPEILPEVALEVRPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATTITR EEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHHH EMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKIAPAVAQAAM HHHHHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHH DGGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQIARAAPEEKKRVVFAEGEEERVLRA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCEEEEECCCHHHHHHH VQIIVDEKLAKPILIGRPAVIEHRIQRYGLRLTPGTDFTVVNTEHDERYRDFWQTYYKMM HHHHHHHHHCCCEEECCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHH ARKGISEQLARVEMRRRTTLIGSMLVKKGEADGMICGTISTTHRHLHFIDQVIGKRPGCS HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCE VYAAMNGLVLPGRQIFLVDTHVNVDPTPEQLAEITIMAAEEVRRFGIEPKVALLSHSNFG EEEECCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC TSNAPSAQKMRDTLAILKERAPDLTVDGEMHGDVALDAALRKEILPESTLEGDANLLVLP CCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEC NIDAANIAYNLLKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMAALLVADVNAAR CCCHHHHHHHHHHHCCCCCEEECCEEECCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSNSHSNPHVTRHMSTQASSKAKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYS CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEEC PGVAFACEEIVENPLNAARFTARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKK CCHHHHHHHHHHCCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHH FAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVEREARKRMKIPVFH HCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHCCCCCCEEE DDQHGTAIVVAAAVTNGLKVVGKDIKKVKLVASGAGAAALACLDLLVDIGLPIENITVTD CCCCCCEEEEEEHHHCCHHHHCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEHHH LAGVVYKGRTELMDPDKERFARETDARTLAEVIDGADIFLGLSAAGVLKQEMVKGMAERP HHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCC LILALANPTPEILPEVALEVRPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATTITR EEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHHH EMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKIAPAVAQAAM HHHHHHHHHHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHH DGGVATRPIEDMEAYKQHLQQFVYHSGTTMKPIFQIARAAPEEKKRVVFAEGEEERVLRA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHCEEEEECCCHHHHHHH VQIIVDEKLAKPILIGRPAVIEHRIQRYGLRLTPGTDFTVVNTEHDERYRDFWQTYYKMM HHHHHHHHHCCCEEECCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHH ARKGISEQLARVEMRRRTTLIGSMLVKKGEADGMICGTISTTHRHLHFIDQVIGKRPGCS HHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCE VYAAMNGLVLPGRQIFLVDTHVNVDPTPEQLAEITIMAAEEVRRFGIEPKVALLSHSNFG EEEECCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC TSNAPSAQKMRDTLAILKERAPDLTVDGEMHGDVALDAALRKEILPESTLEGDANLLVLP CCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEC NIDAANIAYNLLKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMAALLVADVNAAR CCCHHHHHHHHHHHCCCCCEEECCEEECCCCCHHHHHCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]