Click here to switch to the map view.

The map label for this gene is rsmE [H]

Identifier: 161525920

GI number: 161525920

Start: 3003201

End: 3003965

Strand: Direct

Name: rsmE [H]

Synonym: Bmul_2751

Alternate gene names: 161525920

Gene position: 3003201-3003965 (Clockwise)

Preceding gene: 161525919

Following gene: 161525924

Centisome position: 87.09

GC content: 75.29

Gene sequence:

>765_bases
ATGAGCGAAGCCAGCACCACCGCGGCCGTGCCGCGCTTTTTCGTCGACACCGCGTTGCGCGCGGACGCGACGCTCGCACT
GCCCGCCGACGTCGCGCGCCACGCGCAGGTGCTGCGGCTGCAGCCGGGCGATCCGCTCGCGCTGTTCGACGGCACCGGCG
GCCAGTATCGCGCGCGGCTCGTCGAGATCGACAAGCGCAGTGCGCTCGCGCAAATCGACGCCTTCGATCCGGCCGAAGCC
GAGCCGCCGTACCGCGTGACGCTCGCGCAGGGCATCGCGGGCGGCGACAAGATGGACTGGGTGATCGAGAAGGCAGTGGA
ACTCGGCGTCGCGGCCGTCGTGCCGCTGTCGACGGCCCGCGGCGTCGTGAAGCTGTCCGGCGAGCGAGCGGAAAAGCGCG
TCGCGCATTGGCGCGGCGTCGTGCGCGCGTCGTGCGAACAGTGCGGCCGCAACCGCGTGCCGGACGTCGCCGCGGTGCGC
GCATTCGCCGCATGGCTCGACGGCCTGCCGCCGCCTGCCGACGGCGAGCTGCGGCTGCTGCTGTCGCCGCGTGCGAGCAT
CCCGTTCGCGTCGCTGCCCGACGCGCCGCCCGCCGCACCGGTCACGCTGCTGATCGGGCCCGAAGGCGGGCTCTCGCCGG
ACGAGGAAGCGGCCGCGCGGGCACGCGGCTTCACGGCGCTGTCGCTCGGCCCGCGCGTGCTGCGCACCGAGACGGCCGGC
GCGGCCGTCCTGGCCGCCCTCGCCGCGCGCTGGGGCGGCTGGTAA

Upstream 100 bases:

>100_bases
AGTCGCTGACCGCGCCGCAGGACCAGTTCTGGGGCGACCGGTTCGCGCAGATCGAGGATCTCGACGGCTACCGCTGGGCG
CTCGCGCGCCGGCTCGAAGC

Downstream 100 bases:

>100_bases
CGCGCGGCGCAGAGCACGCGAGCGCCGGATGCGAAAAAGCCCGCTGACGCGGGCTTTTCTGCAGATGCCGGCGGATACCG
GCAGATAACGGGCGGGTCGC

Product: 16S ribosomal RNA methyltransferase RsmE

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSEASTTAAVPRFFVDTALRADATLALPADVARHAQVLRLQPGDPLALFDGTGGQYRARLVEIDKRSALAQIDAFDPAEA
EPPYRVTLAQGIAGGDKMDWVIEKAVELGVAAVVPLSTARGVVKLSGERAEKRVAHWRGVVRASCEQCGRNRVPDVAAVR
AFAAWLDGLPPPADGELRLLLSPRASIPFASLPDAPPAAPVTLLIGPEGGLSPDEEAAARARGFTALSLGPRVLRTETAG
AAVLAALAARWGGW

Sequences:

>Translated_254_residues
MSEASTTAAVPRFFVDTALRADATLALPADVARHAQVLRLQPGDPLALFDGTGGQYRARLVEIDKRSALAQIDAFDPAEA
EPPYRVTLAQGIAGGDKMDWVIEKAVELGVAAVVPLSTARGVVKLSGERAEKRVAHWRGVVRASCEQCGRNRVPDVAAVR
AFAAWLDGLPPPADGELRLLLSPRASIPFASLPDAPPAAPVTLLIGPEGGLSPDEEAAARARGFTALSLGPRVLRTETAG
AAVLAALAARWGGW
>Mature_253_residues
SEASTTAAVPRFFVDTALRADATLALPADVARHAQVLRLQPGDPLALFDGTGGQYRARLVEIDKRSALAQIDAFDPAEAE
PPYRVTLAQGIAGGDKMDWVIEKAVELGVAAVVPLSTARGVVKLSGERAEKRVAHWRGVVRASCEQCGRNRVPDVAAVRA
FAAWLDGLPPPADGELRLLLSPRASIPFASLPDAPPAAPVTLLIGPEGGLSPDEEAAARARGFTALSLGPRVLRTETAGA
AVLAALAARWGGW

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

Organism=Escherichia coli, GI87082186, Length=244, Percent_Identity=40.1639344262295, Blast_Score=175, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015947
- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 26575; Mature: 26443

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEASTTAAVPRFFVDTALRADATLALPADVARHAQVLRLQPGDPLALFDGTGGQYRARL
CCCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCEEEEECCCCCEEEEECCCCCEEEEE
VEIDKRSALAQIDAFDPAEAEPPYRVTLAQGIAGGDKMDWVIEKAVELGVAAVVPLSTAR
EEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHEEEHHCCC
GVVKLSGERAEKRVAHWRGVVRASCEQCGRNRVPDVAAVRAFAAWLDGLPPPADGELRLL
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
LSPRASIPFASLPDAPPAAPVTLLIGPEGGLSPDEEAAARARGFTALSLGPRVLRTETAG
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCEEECCCCHHEEECCCH
AAVLAALAARWGGW
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SEASTTAAVPRFFVDTALRADATLALPADVARHAQVLRLQPGDPLALFDGTGGQYRARL
CCCHHHHHHHHHHHHHHHHCCCEEECCHHHHHCCEEEEECCCCCEEEEECCCCCEEEEE
VEIDKRSALAQIDAFDPAEAEPPYRVTLAQGIAGGDKMDWVIEKAVELGVAAVVPLSTAR
EEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCHHHEEEHHCCC
GVVKLSGERAEKRVAHWRGVVRASCEQCGRNRVPDVAAVRAFAAWLDGLPPPADGELRLL
CEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEE
LSPRASIPFASLPDAPPAAPVTLLIGPEGGLSPDEEAAARARGFTALSLGPRVLRTETAG
ECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCCCEEECCCCHHEEECCCH
AAVLAALAARWGGW
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]