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The map label for this gene is exbD1 [H]

Identifier: 161525902

GI number: 161525902

Start: 2986313

End: 2986774

Strand: Reverse

Name: exbD1 [H]

Synonym: Bmul_2733

Alternate gene names: 161525902

Gene position: 2986774-2986313 (Counterclockwise)

Preceding gene: 161525903

Following gene: 161525901

Centisome position: 86.61

GC content: 72.51

Gene sequence:

>462_bases
ATGGCATTCGGCGGACTCGAGCACCACAAGACGTCCGCGCCGATGGCGGAGATCAACATGACGCCGCTGATCGACGTGAT
GCTCGTGCTGCTCGTCATCTTCATCATCACCGCGCCGCTGATGACGCACGCGATCCGGCTCGACTTGCCGAAGGTCGCGG
CGAGCGTCGCGCGCGACACGCCGCAGTCGGTCACGCTGTCGATCGACGATGCGGGCAAGCTGTACTGGAACGACACGCCG
ATCGCGCTCGAGGCGCTGCCCGCGCGCTTCCGGCAGGCCGCCGCGAGCGGCGCGCCGCCCGAGCTGCGGCTGCGCGCGTC
GCGCGCGACGCGCTACGACGTGATCGCGCAGGTGATGGGTGCCGCGCAGGCCGCGGGCCTCACGCGGATCGGCTTCGTCA
CCGACATGCCGCCCGCCGGCACCGCAGGGCCGGCCGCGCCCGCTGCGCCGGCCGCGCACTGA

Upstream 100 bases:

>100_bases
CGTCCGGCAACTCGCCGAGGAACTCGACGGCTTCGCGCGCGATCTGCACGTGTTCGTCTGCGCGCAGCCCGCGTGACGCC
CGCTTCCCGGAGGAACGCTC

Downstream 100 bases:

>100_bases
CGCTACCCGCAGCGCGCGTAGCCGTCGCGGCCGCGATGCGCGATGCCCGCGACACCGGCCTGACGCGCCGGCGCGGGCGG
TATAATCGACGTTTTTCCCG

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MAFGGLEHHKTSAPMAEINMTPLIDVMLVLLVIFIITAPLMTHAIRLDLPKVAASVARDTPQSVTLSIDDAGKLYWNDTP
IALEALPARFRQAAASGAPPELRLRASRATRYDVIAQVMGAAQAAGLTRIGFVTDMPPAGTAGPAAPAAPAAH

Sequences:

>Translated_153_residues
MAFGGLEHHKTSAPMAEINMTPLIDVMLVLLVIFIITAPLMTHAIRLDLPKVAASVARDTPQSVTLSIDDAGKLYWNDTP
IALEALPARFRQAAASGAPPELRLRASRATRYDVIAQVMGAAQAAGLTRIGFVTDMPPAGTAGPAAPAAPAAH
>Mature_152_residues
AFGGLEHHKTSAPMAEINMTPLIDVMLVLLVIFIITAPLMTHAIRLDLPKVAASVARDTPQSVTLSIDDAGKLYWNDTPI
ALEALPARFRQAAASGAPPELRLRASRATRYDVIAQVMGAAQAAGLTRIGFVTDMPPAGTAGPAAPAAPAAH

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=134, Percent_Identity=30.5970149253731, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15987; Mature: 15856

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGGLEHHKTSAPMAEINMTPLIDVMLVLLVIFIITAPLMTHAIRLDLPKVAASVARDT
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PQSVTLSIDDAGKLYWNDTPIALEALPARFRQAAASGAPPELRLRASRATRYDVIAQVMG
CCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
AAQAAGLTRIGFVTDMPPAGTAGPAAPAAPAAH
HHHHCCCHHCCEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AFGGLEHHKTSAPMAEINMTPLIDVMLVLLVIFIITAPLMTHAIRLDLPKVAASVARDT
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PQSVTLSIDDAGKLYWNDTPIALEALPARFRQAAASGAPPELRLRASRATRYDVIAQVMG
CCEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHH
AAQAAGLTRIGFVTDMPPAGTAGPAAPAAPAAH
HHHHCCCHHCCEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]