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The map label for this gene is ybgF [C]

Identifier: 161525758

GI number: 161525758

Start: 2812483

End: 2813232

Strand: Direct

Name: ybgF [C]

Synonym: Bmul_2589

Alternate gene names: 161525758

Gene position: 2812483-2813232 (Clockwise)

Preceding gene: 161525757

Following gene: 161525763

Centisome position: 81.56

GC content: 66.13

Gene sequence:

>750_bases
ATGACGCACCGTGTAACCTGGCTGCGCGCGGTCGCAGCGTTCTGCGTCGTCGGCGCGGCGTGGTCGGCCGCGCCGGCGCA
CGCCGGCATGTTCGACGACAACGAAGCACGCCGCGCCGTGCTCGATCTGCGCAGCAAGAGCGACAACCTGGCGAACCAGT
TGTCGGCCGCCCAGCGTACGATCCTCGATCAATCCGCCCGCCTCGACCAGCTGAACCAGCAGGTCGCGACGCTGCGCGGC
GAGAACGAGGATCTGACGAACCGGCTGACGACGCTCGAGCGGCAGCAGAAGGAGTACTACGAAGATCTCGACACGCGTCT
CAAGAAGTTCGAGCCGCAGCAGAAGACGATCGACGGCGTGGAAGGCACCGTGCAGCCGGGTGAAACGGATGCGCTCAACG
CGGCGCAGCAGCAGTTCCGCAACGGCAACTTCAAGGCAGCTGCGGCGTCGTTCCGCAGCTTCATCGCGAAGTATCCGCAG
AGCCCGTACCAGCCGACCGCGCAGTATTGGCTCGGCAATGCGCAATACGCGCTGCGCGACTACCGCGGTTCGACGGCGAC
GTGGCAAGCGATCGTGAGCAAGTACCCGCAGCACCCGCGCGCCGCGGACGCCCTCGTGGCGATCGGCACGAACCAGCTCG
AGCAAGGCCAGAAGGCGGCCGCGAAGAAGACGTTCGAGCAGGTCGTGTCGCAGTACGCGGGATCGAACGCGGCGCAGACG
GCGCAGGGCAAGCTCGAGTCGATCAAATAA

Upstream 100 bases:

>100_bases
AAGGAAAAGCCGCAAGCAACGGGTCACGACGAAGCGTCGTGGGCGCAGAACCGCCGCGCCGATCTCGTCTACCAACAGTA
AGTAACGGAAGAATCGCTGT

Downstream 100 bases:

>100_bases
TTATCGCGGCGGGTTGTTGACGAACCCACAATCCGTCGCTATAATCTTTTGCTCTTTGGGTCGTTAGCTCAGTTGGTAGA
GCAGCGGACTTTTAATCCGT

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MTHRVTWLRAVAAFCVVGAAWSAAPAHAGMFDDNEARRAVLDLRSKSDNLANQLSAAQRTILDQSARLDQLNQQVATLRG
ENEDLTNRLTTLERQQKEYYEDLDTRLKKFEPQQKTIDGVEGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQ
SPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQT
AQGKLESIK

Sequences:

>Translated_249_residues
MTHRVTWLRAVAAFCVVGAAWSAAPAHAGMFDDNEARRAVLDLRSKSDNLANQLSAAQRTILDQSARLDQLNQQVATLRG
ENEDLTNRLTTLERQQKEYYEDLDTRLKKFEPQQKTIDGVEGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQ
SPYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQT
AQGKLESIK
>Mature_248_residues
THRVTWLRAVAAFCVVGAAWSAAPAHAGMFDDNEARRAVLDLRSKSDNLANQLSAAQRTILDQSARLDQLNQQVATLRGE
NEDLTNRLTTLERQQKEYYEDLDTRLKKFEPQQKTIDGVEGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQS
PYQPTAQYWLGNAQYALRDYRGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQTA
QGKLESIK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybgF [H]

Homologues:

Organism=Escherichia coli, GI1786963, Length=102, Percent_Identity=36.2745098039216, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014162
- InterPro:   IPR013026
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27570; Mature: 27439

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHRVTWLRAVAAFCVVGAAWSAAPAHAGMFDDNEARRAVLDLRSKSDNLANQLSAAQRT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
ILDQSARLDQLNQQVATLRGENEDLTNRLTTLERQQKEYYEDLDTRLKKFEPQQKTIDGV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
EGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHH
YRGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQT
HCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AQGKLESIK
HHHHHHCCC
>Mature Secondary Structure 
THRVTWLRAVAAFCVVGAAWSAAPAHAGMFDDNEARRAVLDLRSKSDNLANQLSAAQRT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
ILDQSARLDQLNQQVATLRGENEDLTNRLTTLERQQKEYYEDLDTRLKKFEPQQKTIDGV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
EGTVQPGETDALNAAQQQFRNGNFKAAAASFRSFIAKYPQSPYQPTAQYWLGNAQYALRD
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHH
YRGSTATWQAIVSKYPQHPRAADALVAIGTNQLEQGQKAAAKKTFEQVVSQYAGSNAAQT
HCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
AQGKLESIK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]