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The map label for this gene is ubiD [H]

Identifier: 161525615

GI number: 161525615

Start: 2660904

End: 2662460

Strand: Direct

Name: ubiD [H]

Synonym: Bmul_2445

Alternate gene names: 161525615

Gene position: 2660904-2662460 (Clockwise)

Preceding gene: 161525613

Following gene: 161525616

Centisome position: 77.16

GC content: 67.69

Gene sequence:

>1557_bases
ATGAAATACAAAGACTTACGCGATTTCATCCAGCGCCTCGAGGCGCTCGGCGAACTGCGGCGCGTCACGCAGCCCGTGTC
GCCCGTGCTCGAAATGACCGAACTGTGCGATCGCGTGCTGCGGGCCGGCGGCCCGGCCTTGCTGTTCGAGGCGCCGCCCG
GCTATGCGTTCCCGGTGCTCGGCAACCTGTTCGGCACGCCGCGGCGCGTCGCGCTCGGCATGGGCGTCGACGCGGGCGAC
GACGCCGCGCTCGATTCGCTGCGCGATCTCGGCCGGCTGCTGTCGGCGCTGAAGGAACCCGATCCGCCCAGGAGCCTGAA
GGACGCCGGCAAGCTGCTGTCGCTCGCGAAGGCCGTCTGGGACATGGCGCCGAAGACGGTTTCGTCGCCGCCGTGCCAGG
AAATCGTGTGGGAAGGCGCCGACGTCGATCTGCACAAGCTGCCGATCCAGACCTGCTGGCCCGGCGACGCAGGGCCGCTC
GTCACGTGGGGGCTGACCGTCACGCGCGGGCCGAACAAGCCGCGCCAGAACCTCGGCATCTACCGGCAGCAGCTGATCGG
CCGTAACAAGCTGATCATGCGCTGGCTCGCGCATCGCGGCGGCGCGCTCGATTTCCGAGAATTCGCGCTGAAGAACCCGG
GCAAGCCGTATCCGGTCGCGGTCGTGCTCGGCGCCGATCCGGCGACGACGCTCGGCGCCGTCACGCCCGTGCCCGATTCG
TTGTCCGAATACCAGTTCGCCGGGCTGCTGCGCGGCAGCCGCACCGAGCTCGCGAAGTGCCTGACGCCGGGCGTCGATAC
GCTGCAGGTACCCGCGCGCGCGGAGATCGTGCTCGAGGGCTTCATTTATCCGCAGGACGGCACGCCGGCCCCGGCGCCGG
CCGGCGCGCCGCCGCGCCCGGCCGGCCAGGCAGCCGCCGCGTATGAACATGCGCTCGAAGGCCCGTACGGCGATCACACC
GGCTATTACAACGAGCAGGAGTGGTTTCCCGTGTTCACGGTCGAGCGGATCACGATGCGTCGCGACGCGATCTACCACTC
GACGTACACCGGCAAACCGCCCGACGAGCCCGCGATCCTCGGCGTCGCGCTGAACGAGGTGTTCGTGCCGCTGCTGCAGA
AGCAGTTCGCGGAGATCACCGACTTCTATCTGCCGCCCGAGGGCTGCAGCTACCGGATGGCGATCGTCCAGATGAAGAAG
AGCTACGCGGGCCACGCGAAGCGCGTGATGTTCGGCGTCTGGAGCTTCCTGCGGCAGTTCATGTATACGAAGTTCATCGT
CGTCGTCGACGAGGACGTGAACATCCGCGACTGGAAGGAAGTCATCTGGGCGATCACGACGCGCGTCGATCCGGTGCGCG
ACACCGTGATGGTCGACAACACGCCGATCGATTATCTCGACTTCGCGTCGCCGGTCGCCGGTCTCGGCTCGAAGATGGGG
CTCGACGCGACCAACAAGTGGCCCGGCGAGACGAACCGCGAATGGGGCCGCCCGATCGAGATGGACGCCAAGGTGAAGGC
GCGCGTCGATCGGCTGTGGCAGGACATCGGGCTTTGA

Upstream 100 bases:

>100_bases
GGACGGCGGGCCGGGTAAAATCGGCGCTCGATTCGGGGCCGCAGCCGGACGCTGCGCCCGCCCACCGTCGCCCGCGTTGC
GAGCGGCCCGGACCTTGTTC

Downstream 100 bases:

>100_bases
GCGCAGCCGCCGCACTGGAACGACGATGAATTTCGCCCCCGCTTCGATGCTGTCCGACGGATTTTTCCTGTCGCTGTCGC
TGTGTCTCGATATCGGCCTC

Product: UbiD family decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFEAPPGYAFPVLGNLFGTPRRVALGMGVDAGD
DAALDSLRDLGRLLSALKEPDPPRSLKDAGKLLSLAKAVWDMAPKTVSSPPCQEIVWEGADVDLHKLPIQTCWPGDAGPL
VTWGLTVTRGPNKPRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKNPGKPYPVAVVLGADPATTLGAVTPVPDS
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQDGTPAPAPAGAPPRPAGQAAAAYEHALEGPYGDHT
GYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAILGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIVQMKK
SYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDNTPIDYLDFASPVAGLGSKMG
LDATNKWPGETNREWGRPIEMDAKVKARVDRLWQDIGL

Sequences:

>Translated_518_residues
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFEAPPGYAFPVLGNLFGTPRRVALGMGVDAGD
DAALDSLRDLGRLLSALKEPDPPRSLKDAGKLLSLAKAVWDMAPKTVSSPPCQEIVWEGADVDLHKLPIQTCWPGDAGPL
VTWGLTVTRGPNKPRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKNPGKPYPVAVVLGADPATTLGAVTPVPDS
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQDGTPAPAPAGAPPRPAGQAAAAYEHALEGPYGDHT
GYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAILGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIVQMKK
SYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDNTPIDYLDFASPVAGLGSKMG
LDATNKWPGETNREWGRPIEMDAKVKARVDRLWQDIGL
>Mature_518_residues
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFEAPPGYAFPVLGNLFGTPRRVALGMGVDAGD
DAALDSLRDLGRLLSALKEPDPPRSLKDAGKLLSLAKAVWDMAPKTVSSPPCQEIVWEGADVDLHKLPIQTCWPGDAGPL
VTWGLTVTRGPNKPRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALKNPGKPYPVAVVLGADPATTLGAVTPVPDS
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQDGTPAPAPAGAPPRPAGQAAAAYEHALEGPYGDHT
GYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAILGVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIVQMKK
SYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDNTPIDYLDFASPVAGLGSKMG
LDATNKWPGETNREWGRPIEMDAKVKARVDRLWQDIGL

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=518, Percent_Identity=65.6370656370656, Blast_Score=701, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=468, Percent_Identity=24.5726495726496, Blast_Score=111, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 57292; Mature: 57292

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFEAPPGYAFPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
GNLFGTPRRVALGMGVDAGDDAALDSLRDLGRLLSALKEPDPPRSLKDAGKLLSLAKAVW
HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DMAPKTVSSPPCQEIVWEGADVDLHKLPIQTCWPGDAGPLVTWGLTVTRGPNKPRQNLGI
HCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHH
YRQQLIGRNKLIMRWLAHRGGALDFREFALKNPGKPYPVAVVLGADPATTLGAVTPVPDS
HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCC
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQDGTPAPAPAGAPPRP
HHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
AGQAAAAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAIL
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEE
GVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDNTPIDYLDFASPVAGLGSKMG
HHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
LDATNKWPGETNREWGRPIEMDAKVKARVDRLWQDIGL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFEAPPGYAFPVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
GNLFGTPRRVALGMGVDAGDDAALDSLRDLGRLLSALKEPDPPRSLKDAGKLLSLAKAVW
HHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
DMAPKTVSSPPCQEIVWEGADVDLHKLPIQTCWPGDAGPLVTWGLTVTRGPNKPRQNLGI
HCCCCCCCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHH
YRQQLIGRNKLIMRWLAHRGGALDFREFALKNPGKPYPVAVVLGADPATTLGAVTPVPDS
HHHHHHCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCC
LSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIYPQDGTPAPAPAGAPPRP
HHHHHHHHHHCCCHHHHHHHHCCCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCC
AGQAAAAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAIL
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCCEE
GVALNEVFVPLLQKQFAEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
MYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDNTPIDYLDFASPVAGLGSKMG
HHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCC
LDATNKWPGETNREWGRPIEMDAKVKARVDRLWQDIGL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA