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The map label for this gene is ybdL [C]

Identifier: 161525613

GI number: 161525613

Start: 2657888

End: 2659084

Strand: Direct

Name: ybdL [C]

Synonym: Bmul_2443

Alternate gene names: 161525613

Gene position: 2657888-2659084 (Clockwise)

Preceding gene: 161525612

Following gene: 161525615

Centisome position: 77.07

GC content: 69.67

Gene sequence:

>1197_bases
ATGAACACCACCGCCGATTCGCTCGTCAAGCTCGCCGCCCGCGTCGACGCGATCCAGCCCTTCTACGTGATGGAACTGAT
GAAGGAGGCACAGCAGCTCGAGTCTGCCGGGCGCGACGTTATCCACATGGGCATAGGCGAGCCCGATTTCACCGCGCCGG
AACCGGTCGTCGAAGCGGCGGCGGCCGCGCTGCGCCGCGGCGTCACGCAATATACGAGCGCGCTCGGCATCGCGCCGCTG
CGCGAGGCGATCGCCGCTCACTATGCGCGCGTCTACGGTCTGACGATCGCGCCGGAGCGGATCGTCGTGACGGCCGGCGC
GTCGGCGGCGCTGCTGCTCGCCTGCCTCGCGCTCGTCGGCCGCGACGACGAGGTGCTGATGCCCGACCCGTCGTATCCGT
GCAACCGGCACTTCGTCGCGGCCGCCGAAGGCCGGCCGGTGCTCGTGCCGAGCGGCCCGGAAGCGCGTTTCCAGCTGACC
GCCGACGACGTGCGCACGCGCTGGAACGCACGCACGCGCGGCGTGCTGCTCGCGTCGCCGTCGAATCCGACCGGCACGTC
GCTCGAGCCGGACGAGCTCAAGCGGATCGTCGAAGCGGTCCGCGCGCGCGGCGGCTTCACGATCGTCGACGAGATCTATC
AGGGGCTCAGCTACGATGCGCCGCCGGTCTCCGCGCTGTCGTTCGGCGACGACGTCGTCACCGTGAACAGCTTCTCGAAG
TACTTCAGCATGACCGGCTGGCGGCTCGGCTGGCTCGTCGTGCCGCCGGCGCTCGTCGGCACGTTCGAGAAGCTGTCGCA
GAACCTGTTCATCTGCCCGTCCGCGCTCGCTCAGCACGCCGCGCTCGCGTGCTTCGAGCCGGCATCGCTCGACATCTACG
AGGCGCGCCGCCTCGAATTCAAGCGTCGCCGCGATTTCATCGCGCCGGCGCTCGAGCGGCTCGGCTTCAGCGTGCCCGTG
ATGCCGGACGGCGCGTTCTATGTCTACGCGCACTGCGGCGGCGTCGCTCATCCAGCGGCCGGCGACAGCGCGGCGCTCAC
GCACGCGATGCTGCACGACGCGGGCGTCGTGCTGGTGCCGGGGATGGATTTCGGCGTTCATGCACCGCACGACTATATCC
GGCTGTCCTATGCGACCGCCTATTCGCGTCTCGAGGAAGCAGTCGACCGGCTCGCCACGCTGTTCGGCCGGCGCTGA

Upstream 100 bases:

>100_bases
GTTCCGGACGGGCGCGCAAGCGCCCGTTTTTTTCGCCCTTTTCCAACGTTTCCCGACGTTTCCGACGTTTTCCGTTTTAC
GCGTGTAACCGCCCCGACCG

Downstream 100 bases:

>100_bases
GTCGCCGCGGCGCGATCGCGCCGCCGCTGCGCCCCTCCAAACGAAAAAAGACACCCGAGGGTGTCTTTTCCATTTCGGCG
CGGAGTAAATCCGACGTTAC

Product: aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MNTTADSLVKLAARVDAIQPFYVMELMKEAQQLESAGRDVIHMGIGEPDFTAPEPVVEAAAAALRRGVTQYTSALGIAPL
REAIAAHYARVYGLTIAPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPEARFQLT
ADDVRTRWNARTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAPPVSALSFGDDVVTVNSFSK
YFSMTGWRLGWLVVPPALVGTFEKLSQNLFICPSALAQHAALACFEPASLDIYEARRLEFKRRRDFIAPALERLGFSVPV
MPDGAFYVYAHCGGVAHPAAGDSAALTHAMLHDAGVVLVPGMDFGVHAPHDYIRLSYATAYSRLEEAVDRLATLFGRR

Sequences:

>Translated_398_residues
MNTTADSLVKLAARVDAIQPFYVMELMKEAQQLESAGRDVIHMGIGEPDFTAPEPVVEAAAAALRRGVTQYTSALGIAPL
REAIAAHYARVYGLTIAPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPEARFQLT
ADDVRTRWNARTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAPPVSALSFGDDVVTVNSFSK
YFSMTGWRLGWLVVPPALVGTFEKLSQNLFICPSALAQHAALACFEPASLDIYEARRLEFKRRRDFIAPALERLGFSVPV
MPDGAFYVYAHCGGVAHPAAGDSAALTHAMLHDAGVVLVPGMDFGVHAPHDYIRLSYATAYSRLEEAVDRLATLFGRR
>Mature_398_residues
MNTTADSLVKLAARVDAIQPFYVMELMKEAQQLESAGRDVIHMGIGEPDFTAPEPVVEAAAAALRRGVTQYTSALGIAPL
REAIAAHYARVYGLTIAPERIVVTAGASAALLLACLALVGRDDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPEARFQLT
ADDVRTRWNARTRGVLLASPSNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAPPVSALSFGDDVVTVNSFSK
YFSMTGWRLGWLVVPPALVGTFEKLSQNLFICPSALAQHAALACFEPASLDIYEARRLEFKRRRDFIAPALERLGFSVPV
MPDGAFYVYAHCGGVAHPAAGDSAALTHAMLHDAGVVLVPGMDFGVHAPHDYIRLSYATAYSRLEEAVDRLATLFGRR

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=417, Percent_Identity=27.3381294964029, Blast_Score=145, Evalue=8e-35,
Organism=Homo sapiens, GI169881279, Length=417, Percent_Identity=27.3381294964029, Blast_Score=145, Evalue=8e-35,
Organism=Homo sapiens, GI56713256, Length=399, Percent_Identity=25.5639097744361, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI56713254, Length=399, Percent_Identity=25.5639097744361, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI169881281, Length=416, Percent_Identity=22.8365384615385, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4507369, Length=374, Percent_Identity=23.5294117647059, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1786816, Length=364, Percent_Identity=30.2197802197802, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788722, Length=395, Percent_Identity=28.6075949367089, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1788627, Length=388, Percent_Identity=27.8350515463918, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787710, Length=335, Percent_Identity=25.3731343283582, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=336, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71994476, Length=336, Percent_Identity=29.1666666666667, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17567369, Length=319, Percent_Identity=27.8996865203762, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17567663, Length=375, Percent_Identity=25.0666666666667, Blast_Score=102, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6322401, Length=393, Percent_Identity=24.1730279898219, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28573069, Length=385, Percent_Identity=27.7922077922078, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI24646114, Length=385, Percent_Identity=27.7922077922078, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI28573067, Length=385, Percent_Identity=27.7922077922078, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI28573065, Length=385, Percent_Identity=27.7922077922078, Blast_Score=139, Evalue=3e-33,
Organism=Drosophila melanogaster, GI18859735, Length=385, Percent_Identity=24.6753246753247, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 42969; Mature: 42969

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTADSLVKLAARVDAIQPFYVMELMKEAQQLESAGRDVIHMGIGEPDFTAPEPVVEAA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHH
AAALRRGVTQYTSALGIAPLREAIAAHYARVYGLTIAPERIVVTAGASAALLLACLALVG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCEEEEECCCHHHHHHHHHHHHC
RDDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPEARFQLTADDVRTRWNARTRGVLLASP
CCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCEEEEECC
SNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAPPVSALSFGDDVVTVNSFSK
CCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHH
YFSMTGWRLGWLVVPPALVGTFEKLSQNLFICPSALAQHAALACFEPASLDIYEARRLEF
HHHCCCCEEEEEECCHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KRRRDFIAPALERLGFSVPVMPDGAFYVYAHCGGVAHPAAGDSAALTHAMLHDAGVVLVP
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEC
GMDFGVHAPHDYIRLSYATAYSRLEEAVDRLATLFGRR
CCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTTADSLVKLAARVDAIQPFYVMELMKEAQQLESAGRDVIHMGIGEPDFTAPEPVVEAA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHH
AAALRRGVTQYTSALGIAPLREAIAAHYARVYGLTIAPERIVVTAGASAALLLACLALVG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEEECCCEEEEECCCHHHHHHHHHHHHC
RDDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPEARFQLTADDVRTRWNARTRGVLLASP
CCCCEECCCCCCCCCCCEEEECCCCEEEEECCCCCEEEEEHHHHHHHCCCCCCEEEEECC
SNPTGTSLEPDELKRIVEAVRARGGFTIVDEIYQGLSYDAPPVSALSFGDDVVTVNSFSK
CCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHH
YFSMTGWRLGWLVVPPALVGTFEKLSQNLFICPSALAQHAALACFEPASLDIYEARRLEF
HHHCCCCEEEEEECCHHHHHHHHHHCCCEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHH
KRRRDFIAPALERLGFSVPVMPDGAFYVYAHCGGVAHPAAGDSAALTHAMLHDAGVVLVP
HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEC
GMDFGVHAPHDYIRLSYATAYSRLEEAVDRLATLFGRR
CCCCCCCCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]