| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is yhjE [H]
Identifier: 161525578
GI number: 161525578
Start: 2621450
End: 2622760
Strand: Direct
Name: yhjE [H]
Synonym: Bmul_2408
Alternate gene names: 161525578
Gene position: 2621450-2622760 (Clockwise)
Preceding gene: 161525577
Following gene: 161525579
Centisome position: 76.02
GC content: 69.57
Gene sequence:
>1311_bases ATGTCCGCATCCCCACCGGCCGTTGCACATGCAACCGGTTCGGCCGGCGCCGTCAGCCACCGGCGCATCGTGTTCGCGAG CTTCATCGGCACCGCGATCGAGTTCTACGATTTCTACGTCTACGCGACGGCCGCCGCGCTCGTGATCGGCCCCGTGTTTT TCCCGCACGGCTCGGCGACCGCGCAGGCGCTGTCCGCCTTCGTCACGTTCGGCATCGCCTTCATCGCGCGACCGATCGGC TCGTTCCTGTTCGGCCATTTCGGCGACCGCATCGGACGCAAGTCGACGCTCGTCGCCTCGCTGCTCGTCATGGGTCTGTC GACGACCGCGATCGGCTTCGTGCCCGGTTACGACGCGATCGGCACGCTTGCGCCCGTGTTGCTGTGCGTGCTGCGCTTCG GCCAGGGCATCGGCCTCGGCGGCGAATGGGGCGGCGCAGCGCTGCTCGCGACCGAGCATGCGCCGCAGGGCAAGCGCGGC TGGTTCGGCATGTTCCCGCAGCTCGGCCCGTCGGTCGGCTTCCTGATGTCGAACGGGCTGTTCTTCGCGCTCGCGCTCTC GCTGTCCGACGCGCAGTTCCGCAGCTGGGGCTGGCGCATTCCGTTCCTCGTCAGCGCGGTGCTCGTCGCGCTCGGCCTGT ACGTGCGGCTCAAGATCGCCGAGACGCCGGCGTTCCAGGCCGCCGTCGACCGCCAGGAGCGCGTGCGCGTGCCGGTCGCG ACGCTCGTGTCGCAGCACTGGCAGCCGACGCTGCTCGGCGCGCTCGCGATGGTCGTCTGCTACACGCTGTTCTATATCTC GACGGTGTTCTCGCTGTCGTACGGCGTGTCGGCGCTGCACATTCCGCGCCAGAGCTTCCTCGGGCTGCTGTGCTTTGCCG TCGTCTTCATGGGGCTCGCGACGCCGCTGTCCGCGTGGGCATCCGATCGGTTCGGCCGCAAGCCGGTACTCGTCGTCGGG TCGATCGCCGCGTTGCTGTCGGGCTTCGCGATGGCGCCGCTGCTCGGCAGCGGATCGATGCCGCTCGTCGCGCTGTTCCT GACGATCGAGCTGTTCCTGATGGGCGTCACGTTCGCGCCGATGGGCGCGCTGCTGCCCGAGCTGTTCCCGACCAACGTCC GCTACACGGGCGCCGGCGTCGCGTACAACCTCGGCGGGATTCTCGGCGCGTCGATCGCGCCGTACATCGCGCAGCTGCTG GCCGCGCGCGGCGGGCTGTCGTGGGTCGGCGGCTACGTGTCCGTCGCGGCCGCGATCAGCCTGATCGGCGTGCTGCTGAT GCGCGAGACGCGCGACACGTCGCTCGTCTGA
Upstream 100 bases:
>100_bases ACGCGCGACGCTCTCCCCCGCATCCATCGCTCGGCCGCGCCGGCGGGCCTTCGTCCGACCGAGCGCGCCAAACCGCCCCA ACGACAAAACGGAGACATCC
Downstream 100 bases:
>100_bases CGCTCCGGGACGACCCGGGTTGCACGGCGCCGGGCGCTCCTTATACTCGGATCCGAGGGCGCCGCCGCGCGCCCCCGATC CGTCCCTGAAGGAGCCGCGT
Product: general substrate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 435
Protein sequence:
>436_residues MSASPPAVAHATGSAGAVSHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSATAQALSAFVTFGIAFIARPIG SFLFGHFGDRIGRKSTLVASLLVMGLSTTAIGFVPGYDAIGTLAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPQGKRG WFGMFPQLGPSVGFLMSNGLFFALALSLSDAQFRSWGWRIPFLVSAVLVALGLYVRLKIAETPAFQAAVDRQERVRVPVA TLVSQHWQPTLLGALAMVVCYTLFYISTVFSLSYGVSALHIPRQSFLGLLCFAVVFMGLATPLSAWASDRFGRKPVLVVG SIAALLSGFAMAPLLGSGSMPLVALFLTIELFLMGVTFAPMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLL AARGGLSWVGGYVSVAAAISLIGVLLMRETRDTSLV
Sequences:
>Translated_436_residues MSASPPAVAHATGSAGAVSHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSATAQALSAFVTFGIAFIARPIG SFLFGHFGDRIGRKSTLVASLLVMGLSTTAIGFVPGYDAIGTLAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPQGKRG WFGMFPQLGPSVGFLMSNGLFFALALSLSDAQFRSWGWRIPFLVSAVLVALGLYVRLKIAETPAFQAAVDRQERVRVPVA TLVSQHWQPTLLGALAMVVCYTLFYISTVFSLSYGVSALHIPRQSFLGLLCFAVVFMGLATPLSAWASDRFGRKPVLVVG SIAALLSGFAMAPLLGSGSMPLVALFLTIELFLMGVTFAPMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLL AARGGLSWVGGYVSVAAAISLIGVLLMRETRDTSLV >Mature_435_residues SASPPAVAHATGSAGAVSHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSATAQALSAFVTFGIAFIARPIGS FLFGHFGDRIGRKSTLVASLLVMGLSTTAIGFVPGYDAIGTLAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPQGKRGW FGMFPQLGPSVGFLMSNGLFFALALSLSDAQFRSWGWRIPFLVSAVLVALGLYVRLKIAETPAFQAAVDRQERVRVPVAT LVSQHWQPTLLGALAMVVCYTLFYISTVFSLSYGVSALHIPRQSFLGLLCFAVVFMGLATPLSAWASDRFGRKPVLVVGS IAALLSGFAMAPLLGSGSMPLVALFLTIELFLMGVTFAPMGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLLA ARGGLSWVGGYVSVAAAISLIGVLLMRETRDTSLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=440, Percent_Identity=52.2727272727273, Blast_Score=394, Evalue=1e-111, Organism=Escherichia coli, GI1788292, Length=417, Percent_Identity=37.1702637889688, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI1790550, Length=428, Percent_Identity=32.0093457943925, Blast_Score=231, Evalue=8e-62, Organism=Escherichia coli, GI1788942, Length=430, Percent_Identity=30.9302325581395, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI87082404, Length=407, Percent_Identity=24.3243243243243, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI87082231, Length=228, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 45743; Mature: 45612
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPPAVAHATGSAGAVSHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSAT CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AQALSAFVTFGIAFIARPIGSFLFGHFGDRIGRKSTLVASLLVMGLSTTAIGFVPGYDAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHH GTLAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPQGKRGWFGMFPQLGPSVGFLMSNGL HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHCCH FFALALSLSDAQFRSWGWRIPFLVSAVLVALGLYVRLKIAETPAFQAAVDRQERVRVPVA HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCHHHHHCCHHH TLVSQHWQPTLLGALAMVVCYTLFYISTVFSLSYGVSALHIPRQSFLGLLCFAVVFMGLA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHH TPLSAWASDRFGRKPVLVVGSIAALLSGFAMAPLLGSGSMPLVALFLTIELFLMGVTFAP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH MGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLLAARGGLSWVGGYVSVAAAIS HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LIGVLLMRETRDTSLV HHHHHHHHCCCCCCCC >Mature Secondary Structure SASPPAVAHATGSAGAVSHRRIVFASFIGTAIEFYDFYVYATAAALVIGPVFFPHGSAT CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH AQALSAFVTFGIAFIARPIGSFLFGHFGDRIGRKSTLVASLLVMGLSTTAIGFVPGYDAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCHHH GTLAPVLLCVLRFGQGIGLGGEWGGAALLATEHAPQGKRGWFGMFPQLGPSVGFLMSNGL HHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCCHHHHHHCCH FFALALSLSDAQFRSWGWRIPFLVSAVLVALGLYVRLKIAETPAFQAAVDRQERVRVPVA HHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHCHHHHHCCHHH TLVSQHWQPTLLGALAMVVCYTLFYISTVFSLSYGVSALHIPRQSFLGLLCFAVVFMGLA HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHH TPLSAWASDRFGRKPVLVVGSIAALLSGFAMAPLLGSGSMPLVALFLTIELFLMGVTFAP HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH MGALLPELFPTNVRYTGAGVAYNLGGILGASIAPYIAQLLAARGGLSWVGGYVSVAAAIS HHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LIGVLLMRETRDTSLV HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]