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The map label for this gene is trbB [H]

Identifier: 161525520

GI number: 161525520

Start: 2559726

End: 2560781

Strand: Direct

Name: trbB [H]

Synonym: Bmul_2350

Alternate gene names: 161525520

Gene position: 2559726-2560781 (Clockwise)

Preceding gene: 161525519

Following gene: 161525521

Centisome position: 74.23

GC content: 68.75

Gene sequence:

>1056_bases
ATGAGCGCCGTTCCACAGATTCCGCCCGAACCACGCTCGTCGGCCACTACTTCACAGGATCGCCGCATCCAGATGCTGCG
CACGGCAATGGGGCCGCTGATCGCCGCCGCGCTCGAAGACCCGGACGTGGTGGAAATCATGCTCAACCCTGATCGCACCC
TATGGGTGGATCGCTTGTCGTCTGGCCGCGCGCCGCTGGGCGTGGAGCTGCCCGAGGCCGACGGCGAACGCATCATTCGC
CTGGTGGCCGCGCACGTCGGCGCGGAGGTGCATCGCGGCCAGCCGCTCTTGACCGCCGAATTGCCCGAGACGGGCGAACG
CTTCGAGGGCATCTTGCCGCCGGCAGCGCCAGGGCCGGCGTTCGCGCTGCGCAAGCGGGCCGTGAGCATCATCGGCCTGA
ATCGCTATGTGGCCGACGGCATCCTGACTGCCGGCCAGGCGGACTTCCTGCGCCGCGCCGTGCGCGAGCGCCAGAACATC
CTGATCGCCGGCGGCACCAGTACTGGCAAGACCACGCTCGCCAACGCGCTGCTGGCCGAGATCGCTGCCACGGGCGACCG
CGTGCTGGTGCTCGAAGACACCATCGAGCTGCAATGCGCGGCCCGCGACCACGTGCCGCTGCGCACGCGGGCCGGCGTCG
TGTCGATGCAGGAGCTGGTGCGCGCCACGATGCGCCTGCGCCCGGATCGCGTGATCGTCGGCGAGGTGCGCGGCGGCGAG
GCACTGGATCTCATCAAGGTCTGGGGCACCGGCCATCCTGGCGGCCTTGCCACGATCCACGCGAGTTCCGCGTTGGGCGC
GCTGCTGCGCGTGGAGCAACTGATTCTCGAAGTGGCCGTGAACCCGCCGCGCGCGCTGATCGCCGAGGCGGTCAACGTCG
TGATCTACATCGCTGGCCGTGGCCGCAAGCGCCACGTCGAGAGCATTGCCCGTGTCGTCGGTTTCGACGGCGTGGGCTAC
CACCTGGCGGATGTGCTGGAAACGCCGTTTCCCGAGTTGCCGCCGATTTCTTCCCCGTCCCCTGACCACTTGGAGAACTG
CCATGACGCACGTTGA

Upstream 100 bases:

>100_bases
TGGTGCGCGACGTGGTGGAAGAACTGCACCCGGACACCGTGCGCATGGATGACGCGGCGGCGCTGGCCGGAGCCCATGAA
CGTGCTGCGGAGCGTGCCTC

Downstream 100 bases:

>100_bases
TGCTTTCCGTCTTTCCGTAAATCCGCATCCCAGTCTCGCAAGACTGCGCCTCCTGGCTCGCCCTGCCGCACAGGGACTGC
TGCTGGCCGCACTGATGTTG

Product: P-type conjugative transfer ATPase TrbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSAVPQIPPEPRSSATTSQDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWVDRLSSGRAPLGVELPEADGERIIR
LVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAVSIIGLNRYVADGILTAGQADFLRRAVRERQNI
LIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
ALDLIKVWGTGHPGGLATIHASSALGALLRVEQLILEVAVNPPRALIAEAVNVVIYIAGRGRKRHVESIARVVGFDGVGY
HLADVLETPFPELPPISSPSPDHLENCHDAR

Sequences:

>Translated_351_residues
MSAVPQIPPEPRSSATTSQDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWVDRLSSGRAPLGVELPEADGERIIR
LVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAVSIIGLNRYVADGILTAGQADFLRRAVRERQNI
LIAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
ALDLIKVWGTGHPGGLATIHASSALGALLRVEQLILEVAVNPPRALIAEAVNVVIYIAGRGRKRHVESIARVVGFDGVGY
HLADVLETPFPELPPISSPSPDHLENCHDAR
>Mature_350_residues
SAVPQIPPEPRSSATTSQDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWVDRLSSGRAPLGVELPEADGERIIRL
VAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPAFALRKRAVSIIGLNRYVADGILTAGQADFLRRAVRERQNIL
IAGGTSTGKTTLANALLAEIAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGEA
LDLIKVWGTGHPGGLATIHASSALGALLRVEQLILEVAVNPPRALIAEAVNVVIYIAGRGRKRHVESIARVVGFDGVGYH
LADVLETPFPELPPISSPSPDHLENCHDAR

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

Organism=Escherichia coli, GI1786296, Length=150, Percent_Identity=29.3333333333333, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014149
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 37595; Mature: 37464

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAVPQIPPEPRSSATTSQDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWVDRLS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHC
SGRAPLGVELPEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPA
CCCCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHCCCCCCCCCCHH
FALRKRAVSIIGLNRYVADGILTAGQADFLRRAVRERQNILIAGGTSTGKTTLANALLAE
HHHHHHHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH
IAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
HHCCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
ALDLIKVWGTGHPGGLATIHASSALGALLRVEQLILEVAVNPPRALIAEAVNVVIYIAGR
EEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEECC
GRKRHVESIARVVGFDGVGYHLADVLETPFPELPPISSPSPDHLENCHDAR
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure 
SAVPQIPPEPRSSATTSQDRRIQMLRTAMGPLIAAALEDPDVVEIMLNPDRTLWVDRLS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEHHHHC
SGRAPLGVELPEADGERIIRLVAAHVGAEVHRGQPLLTAELPETGERFEGILPPAAPGPA
CCCCCCEEECCCCCHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHCCCCCCCCCCHH
FALRKRAVSIIGLNRYVADGILTAGQADFLRRAVRERQNILIAGGTSTGKTTLANALLAE
HHHHHHHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHH
IAATGDRVLVLEDTIELQCAARDHVPLRTRAGVVSMQELVRATMRLRPDRVIVGEVRGGE
HHCCCCEEEEEECCEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHCCCCEEEEEECCCCC
ALDLIKVWGTGHPGGLATIHASSALGALLRVEQLILEVAVNPPRALIAEAVNVVIYIAGR
EEEEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEEEEEEECC
GRKRHVESIARVVGFDGVGYHLADVLETPFPELPPISSPSPDHLENCHDAR
CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]