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The map label for this gene is yubP [H]

Identifier: 161525491

GI number: 161525491

Start: 2532207

End: 2533034

Strand: Direct

Name: yubP [H]

Synonym: Bmul_2321

Alternate gene names: 161525491

Gene position: 2532207-2533034 (Clockwise)

Preceding gene: 161525490

Following gene: 161525492

Centisome position: 73.43

GC content: 64.49

Gene sequence:

>828_bases
ATGCAACTCGCATCCCGATTCGCTTCCCGTTCGCCGTCGCTGCGCAGCGATTACCCGCTGTCCGACGATCAAATCCGCAA
GGTCGCGCCGTCCATCTTCGCGGACGCTCCGCACGAAAGCCGTTCCGAGCGGTACGCCTATATCCCGACCGCCGCCGTGC
TGGCGGAACTGCGCAAGGAAGGGTTTGAACCATTCATGGCAGCGCAGACCCGCGTGCGCCACGACGACCGCCGCGACTAC
ACCAAACACATGCTGCGCCTGCGCCACGCCAGCCAGATCAACGGCGCGGAGGCTAACGAAATCGTGCTGCTGAACTCGCA
TGACGGCACGAGCAGCTATCAGATGCTGGCCGGAATGTTCCGGTTCGTGTGCAGCAATGGCCTTGTCTGCGGCGACACCG
TGGCCGATGTGCGAGTGCCCCACAAAGGCGACGTGGCCGGTTCCGTCATCGAAGGCGCTTACGAAGTCCTGCGCGGCTTC
GACCGCGTGCAGGAATCCCGCGATTCCATGCGTGCCATCACCTTGAACGATGGCGAATCCGAAGTGTTCGCCCGCGCCGC
GCTGGCCCTCAAGTACGACGACCCCGACAAGCCCGCGCCCATCACGGAATCGCAAATCCTGATGCCGCGCCGCTTTGATG
ACCGCCGCCCGGACTTGTGGAGCGTGTTCAACCGCACGCAAGAGAACCTGACCCAAGGCGGCCTGCGCGGACGCAGCGCC
AACGGACGCCGCCACCAAACCCGCCCGGTGCAGGGCATCGACCAGAACATCCGCCTCAACCGTGCGCTTTGGCTGCTGGC
CGATGGCATGCGCCAGTTGAAAGCCTGA

Upstream 100 bases:

>100_bases
CCTCGTGCCGACCGCACCGAACAGCCGAAAGGCTGGGCTCCGAATCTAGGAATCCGGTGTGCGGTTTGAACAGCAAACCC
TTTTCGTCAGGAGAAATGCC

Downstream 100 bases:

>100_bases
ATCCCTACGCGGCAGGGGCAGGCAGCAGCCCTTGCCGCTTCTCTCGCTGCTGCATCCCTAACCGCAAGGAGTTATCACCA
TGAATGCCGTTACCCAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MQLASRFASRSPSLRSDYPLSDDQIRKVAPSIFADAPHESRSERYAYIPTAAVLAELRKEGFEPFMAAQTRVRHDDRRDY
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAYEVLRGF
DRVQESRDSMRAITLNDGESEVFARAALALKYDDPDKPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTQGGLRGRSA
NGRRHQTRPVQGIDQNIRLNRALWLLADGMRQLKA

Sequences:

>Translated_275_residues
MQLASRFASRSPSLRSDYPLSDDQIRKVAPSIFADAPHESRSERYAYIPTAAVLAELRKEGFEPFMAAQTRVRHDDRRDY
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAYEVLRGF
DRVQESRDSMRAITLNDGESEVFARAALALKYDDPDKPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTQGGLRGRSA
NGRRHQTRPVQGIDQNIRLNRALWLLADGMRQLKA
>Mature_275_residues
MQLASRFASRSPSLRSDYPLSDDQIRKVAPSIFADAPHESRSERYAYIPTAAVLAELRKEGFEPFMAAQTRVRHDDRRDY
TKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMFRFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAYEVLRGF
DRVQESRDSMRAITLNDGESEVFARAALALKYDDPDKPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTQGGLRGRSA
NGRRHQTRPVQGIDQNIRLNRALWLLADGMRQLKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=268, Percent_Identity=55.5970149253731, Blast_Score=312, Evalue=2e-86,
Organism=Escherichia coli, GI87081705, Length=269, Percent_Identity=55.3903345724907, Blast_Score=301, Evalue=2e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 31027; Mature: 31027

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLASRFASRSPSLRSDYPLSDDQIRKVAPSIFADAPHESRSERYAYIPTAAVLAELRKE
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHH
GFEPFMAAQTRVRHDDRRDYTKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAYEVLRGFDRVQESRDSMRAITLNDGES
HHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCH
EVFARAALALKYDDPDKPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTQGGLRGRSA
HHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
NGRRHQTRPVQGIDQNIRLNRALWLLADGMRQLKA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLASRFASRSPSLRSDYPLSDDQIRKVAPSIFADAPHESRSERYAYIPTAAVLAELRKE
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHH
GFEPFMAAQTRVRHDDRRDYTKHMLRLRHASQINGAEANEIVLLNSHDGTSSYQMLAGMF
CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH
RFVCSNGLVCGDTVADVRVPHKGDVAGSVIEGAYEVLRGFDRVQESRDSMRAITLNDGES
HHHHCCCCEECCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCH
EVFARAALALKYDDPDKPAPITESQILMPRRFDDRRPDLWSVFNRTQENLTQGGLRGRSA
HHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
NGRRHQTRPVQGIDQNIRLNRALWLLADGMRQLKA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]