| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161525405
Identifier: 161525405
GI number: 161525405
Start: 2448596
End: 2449735
Strand: Direct
Name: 161525405
Synonym: Bmul_2235
Alternate gene names: NA
Gene position: 2448596-2449735 (Clockwise)
Preceding gene: 161525398
Following gene: 161525406
Centisome position: 71.01
GC content: 70.0
Gene sequence:
>1140_bases ATGCCGCTCTTTCGCGCCCTTCCGACGTGCCGCACGCCACGCCCCCTCGTCGCGTTGCTCGCCGCCCTTGCCTGCTCGGT CGCAGCCGCGAGCGCCGCGGCGCGGCTGCCCGTCGAGGAACTCGTCGTGCCGCCCGGCTTCCACGTCGAGGTGCTTACCG ACGCGGTGCCGAGCGCGCGCGAAATGGCGTGGTCGCCGCGCGGCGTGCTGTACGTCGGCACCCGCGAAGGCCGCGTGCAT GCGTTCACGATGCAGGGCGGCCGCATCGGCGCGCACTACGTGATCGCGTCCGGGCTCGACATGCCGGTCGGCGTCGCGTA CCGCGACGGCGCACTCTATATTTCCGCCGTGTCGCGCATTCTACGCATCGACGGCATCGACGACCGGCTCGCGAAGCCGC CCGCGCCGGCCGTGGTCACCGACACGCTGCCCACCCAGCATCATCACGGCTGGAAATTCATCGCGTTCGGCCCGGACGGC AAGCTCTACGTGCCGACCGGCGCGCCGTGCAACGTCTGCCTTGCGGACCGCAACCGCTACGCGATCATCGCGCGGATGAA CGCCGACGGCAGCGGCCGCGACGTGTTCGCGCGTGGCATACGCAATACGGTCGGCTTCGCATGGCATCCGGATACGGGCG AGCTCTGGTTTACCGACAACGGGCGCGACCTGATGGGCGACGACGTGCCGGACGACGAGCTGAACCGCGCGCCACGCGCC GGGCTCGACTTCGGCTTTCCCTACTGCCATGGCGGCGATACGCCCGACCCCGAATTCGGCAGCACCGACGTTTGCCGCCG CTACGTGCCGCCCGTGCTGAAGCTCGGCGCGCACGTGGCCGCGCTCGGGATGCGCTTCTATACGGGCTCGATGTTTCCGG CGTCGTACCGCAACAACGTCTTCATCGCCGAGCATGGGTCATGGAACCGCAGCACCAAGGTGGGCTACCGCGTCATGCGC GCGATCGTTTCCGCGGACGGCAGCCACGCGCGGCAGACGCCGTTCGTCACGGGCTGGCTGCGACCGGACGGCAGCGTTTG GGGCCGCCCCGCCGACGTGCTGCCGCTGCCCGACGGCTCGCTGCTCGTCAGCGACGATTACGCGGGCGCGATCTACCGGA TCACGTATGCGGCACCTTGA
Upstream 100 bases:
>100_bases GGAAACTGGAGGTACAACAAACACTTACGCGCAAAAAATCCGCGGACGGCCTGCGGGCGCGGCATACAATCGTCGTGTCA GCGACCGCCCCCGCGCCGCC
Downstream 100 bases:
>100_bases CGCAGCGTGCGGATGACCGGCCCCGACCGGGCATCGTAGAATGCGTGCCGGGCCGTGCGCCCGCGCCGGCCTGCCGGCTG CCCATGCCAACGACAATACG
Product: glucose/sorbosone dehydrogenase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MPLFRALPTCRTPRPLVALLAALACSVAAASAAARLPVEELVVPPGFHVEVLTDAVPSAREMAWSPRGVLYVGTREGRVH AFTMQGGRIGAHYVIASGLDMPVGVAYRDGALYISAVSRILRIDGIDDRLAKPPAPAVVTDTLPTQHHHGWKFIAFGPDG KLYVPTGAPCNVCLADRNRYAIIARMNADGSGRDVFARGIRNTVGFAWHPDTGELWFTDNGRDLMGDDVPDDELNRAPRA GLDFGFPYCHGGDTPDPEFGSTDVCRRYVPPVLKLGAHVAALGMRFYTGSMFPASYRNNVFIAEHGSWNRSTKVGYRVMR AIVSADGSHARQTPFVTGWLRPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYAAP
Sequences:
>Translated_379_residues MPLFRALPTCRTPRPLVALLAALACSVAAASAAARLPVEELVVPPGFHVEVLTDAVPSAREMAWSPRGVLYVGTREGRVH AFTMQGGRIGAHYVIASGLDMPVGVAYRDGALYISAVSRILRIDGIDDRLAKPPAPAVVTDTLPTQHHHGWKFIAFGPDG KLYVPTGAPCNVCLADRNRYAIIARMNADGSGRDVFARGIRNTVGFAWHPDTGELWFTDNGRDLMGDDVPDDELNRAPRA GLDFGFPYCHGGDTPDPEFGSTDVCRRYVPPVLKLGAHVAALGMRFYTGSMFPASYRNNVFIAEHGSWNRSTKVGYRVMR AIVSADGSHARQTPFVTGWLRPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYAAP >Mature_378_residues PLFRALPTCRTPRPLVALLAALACSVAAASAAARLPVEELVVPPGFHVEVLTDAVPSAREMAWSPRGVLYVGTREGRVHA FTMQGGRIGAHYVIASGLDMPVGVAYRDGALYISAVSRILRIDGIDDRLAKPPAPAVVTDTLPTQHHHGWKFIAFGPDGK LYVPTGAPCNVCLADRNRYAIIARMNADGSGRDVFARGIRNTVGFAWHPDTGELWFTDNGRDLMGDDVPDDELNRAPRAG LDFGFPYCHGGDTPDPEFGSTDVCRRYVPPVLKLGAHVAALGMRFYTGSMFPASYRNNVFIAEHGSWNRSTKVGYRVMRA IVSADGSHARQTPFVTGWLRPDGSVWGRPADVLPLPDGSLLVSDDYAGAIYRITYAAP
Specific function: Unknown
COG id: COG2133
COG function: function code G; Glucose/sorbosone dehydrogenases
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR012938 - InterPro: IPR011041 [H]
Pfam domain/function: PF07995 GSDH [H]
EC number: NA
Molecular weight: Translated: 40983; Mature: 40852
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLFRALPTCRTPRPLVALLAALACSVAAASAAARLPVEELVVPPGFHVEVLTDAVPSAR CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCCHH EMAWSPRGVLYVGTREGRVHAFTMQGGRIGAHYVIASGLDMPVGVAYRDGALYISAVSRI HHCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCEEEHHHHHHH LRIDGIDDRLAKPPAPAVVTDTLPTQHHHGWKFIAFGPDGKLYVPTGAPCNVCLADRNRY HHCCCCCHHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCE AIIARMNADGSGRDVFARGIRNTVGFAWHPDTGELWFTDNGRDLMGDDVPDDELNRAPRA EEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCC GLDFGFPYCHGGDTPDPEFGSTDVCRRYVPPVLKLGAHVAALGMRFYTGSMFPASYRNNV CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE FIAEHGSWNRSTKVGYRVMRAIVSADGSHARQTPFVTGWLRPDGSVWGRPADVLPLPDGS EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCC LLVSDDYAGAIYRITYAAP EEEECCCCCEEEEEEEECC >Mature Secondary Structure PLFRALPTCRTPRPLVALLAALACSVAAASAAARLPVEELVVPPGFHVEVLTDAVPSAR CHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEECCCCCCHH EMAWSPRGVLYVGTREGRVHAFTMQGGRIGAHYVIASGLDMPVGVAYRDGALYISAVSRI HHCCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCEEEHHHHHHH LRIDGIDDRLAKPPAPAVVTDTLPTQHHHGWKFIAFGPDGKLYVPTGAPCNVCLADRNRY HHCCCCCHHHCCCCCCEEEECCCCCCCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCE AIIARMNADGSGRDVFARGIRNTVGFAWHPDTGELWFTDNGRDLMGDDVPDDELNRAPRA EEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCCC GLDFGFPYCHGGDTPDPEFGSTDVCRRYVPPVLKLGAHVAALGMRFYTGSMFPASYRNNV CCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE FIAEHGSWNRSTKVGYRVMRAIVSADGSHARQTPFVTGWLRPDGSVWGRPADVLPLPDGS EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCC LLVSDDYAGAIYRITYAAP EEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]