Click here to switch to the map view.

The map label for this gene is ybcJ [C]

Identifier: 161525381

GI number: 161525381

Start: 2426195

End: 2426602

Strand: Direct

Name: ybcJ [C]

Synonym: Bmul_2211

Alternate gene names: 161525381

Gene position: 2426195-2426602 (Clockwise)

Preceding gene: 161525379

Following gene: 161525382

Centisome position: 70.36

GC content: 65.44

Gene sequence:

>408_bases
ATGCAGCAGGTAACGCGAGAGACACGCGGCCGATGCGGCCGGTTCTGCAATCTCTCAGACTGTTACCCACGGTTTCATTT
GCTGACGAATCGCTCACACTCGCTCACATCCGGCCCGCTCGCGCGCCGGCGCGCGGTGCCGTATGATGCGGGGCGATTCC
TCCCGCGCATCGCGCGCACTCTCGTCATGCCCAATCTGGATTTCACGCTGACCGGCGACTACGTCGAGCTGCACAACCTT
CTGAAGATCACCGGCCTCGCCGACAGCGGCGGCACCGCGAAGATGATCGTCGCGTCCGGCGCGGTGAAAGTCGACGGCGC
GGTCGAGCTGCGCAAGACCTGCAAGATTCGCGCAGGCCAGGTCGTGCTGTTCGGCGATACGCGCATCGCCGTGCACGGCG
GCGCGTAG

Upstream 100 bases:

>100_bases
CCGATCAGCATCGTACGAATCTTGGACATGACAATCCTCCTCAAGAGTTGTGGGCGCGAACCGCGTCGGTGCGATCCGTC
GCGTCGCCCGCTGCGAAAAC

Downstream 100 bases:

>100_bases
CGTTCCCCCTGTCCGCGACATGGCCATCGCCGCGCACGTTCGACACCGTGCGAATAAAGCCGTAAGCTAGCCGTCTCTCA
AAATAAATACAGGCAGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MQQVTRETRGRCGRFCNLSDCYPRFHLLTNRSHSLTSGPLARRRAVPYDAGRFLPRIARTLVMPNLDFTLTGDYVELHNL
LKITGLADSGGTAKMIVASGAVKVDGAVELRKTCKIRAGQVVLFGDTRIAVHGGA

Sequences:

>Translated_135_residues
MQQVTRETRGRCGRFCNLSDCYPRFHLLTNRSHSLTSGPLARRRAVPYDAGRFLPRIARTLVMPNLDFTLTGDYVELHNL
LKITGLADSGGTAKMIVASGAVKVDGAVELRKTCKIRAGQVVLFGDTRIAVHGGA
>Mature_135_residues
MQQVTRETRGRCGRFCNLSDCYPRFHLLTNRSHSLTSGPLARRRAVPYDAGRFLPRIARTLVMPNLDFTLTGDYVELHNL
LKITGLADSGGTAKMIVASGAVKVDGAVELRKTCKIRAGQVVLFGDTRIAVHGGA

Specific function: Unknown

COG id: COG2501

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081752, Length=58, Percent_Identity=55.1724137931034, Blast_Score=63, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14741; Mature: 14741

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQVTRETRGRCGRFCNLSDCYPRFHLLTNRSHSLTSGPLARRRAVPYDAGRFLPRIART
CCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH
LVMPNLDFTLTGDYVELHNLLKITGLADSGGTAKMIVASGAVKVDGAVELRKTCKIRAGQ
HHCCCCCEEEECCHHHHHHEEEEEECCCCCCCEEEEEECCCEEECCHHHHHHHCCCCCCE
VVLFGDTRIAVHGGA
EEEECCCEEEEECCC
>Mature Secondary Structure
MQQVTRETRGRCGRFCNLSDCYPRFHLLTNRSHSLTSGPLARRRAVPYDAGRFLPRIART
CCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHH
LVMPNLDFTLTGDYVELHNLLKITGLADSGGTAKMIVASGAVKVDGAVELRKTCKIRAGQ
HHCCCCCEEEECCHHHHHHEEEEEECCCCCCCEEEEEECCCEEECCHHHHHHHCCCCCCE
VVLFGDTRIAVHGGA
EEEECCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA