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The map label for this gene is yhcM [H]

Identifier: 161524917

GI number: 161524917

Start: 1925665

End: 1926762

Strand: Reverse

Name: yhcM [H]

Synonym: Bmul_1744

Alternate gene names: 161524917

Gene position: 1926762-1925665 (Counterclockwise)

Preceding gene: 161524918

Following gene: 161524916

Centisome position: 55.87

GC content: 64.39

Gene sequence:

>1098_bases
ATGAACGTCACCGAATACTACACACGCGAGCTGACCACGCGCGGCTATCAGTCGGACGCCGCGCAGCGGGCGGCCGTCGA
TCGCCTGCAGCGCTGCTACGACGAGTGGGTCGCGTACAAGGCGCGCCGCTCGAACGCGTTCAAGAAGCTGATCAATCACC
CCGATCTGCCGCGCGGCGTCTACATGTGGGGCGGCGTCGGCCGCGGCAAGAGCTTCCTGATGGACAGCTTCTACGCGGTC
GTGCCCGTCCAGCGCAAGACGCGCCTGCATTTCCACGAGTTCATGCGCGAAGTGCACCGCGAGCTCGAGGAACTGAAGGG
GCAGGCCGATCCGCTCGACGAGCTCGCCCGCCGTATCGCGAAGCGCTACCGGCTGATCTGCTTCGACGAATTCCACGTGT
CCGACATCGCCGACGCGATGATCCTGTACCGGCTGCTCGATCGGCTGTTTACGAACGGCGTGCAGTTCGTGATGACGTCC
AACTACGACCCGGACGACCTCTATCCGGACGGCCTGCATCGCGACCGCATGCTGCCGGCGATCGCGCTGATCAAGGAGAA
GCTCGACGTGATCAATGTCGATGCGGGCATCGACTATCGGCAGCGCACGCTCGCGCAGGTGCAGATGTATCACACGCCGC
TCGGCGCGCAGGCCGATCGTGAACTGCGTCATGCGTTCGCGAAGCTCGCGGCGGTGCCCGACGAAAGTCCGATCCTGCAT
ATCGAGAAGCGCGAGCTGAAGGCCTTGCGCAAGGCCGACGGCGTCGTCTGGTTCGATTTCGCGACGCTGTGCGGCGGGCC
GCGCTCGCAGAACGACTACCTCGAACTGGCGAGCCGCTTTCATGCGATCGTGCTGTCCGAGGTGCCGCAGATGTCGCCGC
GCATGGCGTCCGAAGCGCGGCGCTTTACCTGGCTGATCGACGTGCTGTACGACCACAAGGTGAAGCTGCTGATGTCGGCG
GCGGTGCCGGCCGAGCAGCTCTATGTCGAAGGCCCGATGGCCAACGAGTTCGCGCGTACGGTGTCGCGCATCGTCGAGAT
GCAGTCGAAGGAATATCTCGAGACGCCGCGGCGCATCGTCGATACTTCGCTCACCTGA

Upstream 100 bases:

>100_bases
TGAGCGTGGTCCGGCGCCGGCCGCACGTCGGCCGGCGCAGCCGTCTCATGACGAAGGCGGGCGGGGTTTCCCGCTCGCCT
TCGTTTTTTTGGTTTGCCCG

Downstream 100 bases:

>100_bases
GCGCGGCCGCGCGCGTTGCGATTCGATCGTTAAATCCGGTCAAATGCATCGAATCGACGCGCATTTTCAGATTCGTCTTA
TATTCAGCATCGAGGTCAGC

Product: AFG1 family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNVTEYYTRELTTRGYQSDAAQRAAVDRLQRCYDEWVAYKARRSNAFKKLINHPDLPRGVYMWGGVGRGKSFLMDSFYAV
VPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMTS
NYDPDDLYPDGLHRDRMLPAIALIKEKLDVINVDAGIDYRQRTLAQVQMYHTPLGAQADRELRHAFAKLAAVPDESPILH
IEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSA
AVPAEQLYVEGPMANEFARTVSRIVEMQSKEYLETPRRIVDTSLT

Sequences:

>Translated_365_residues
MNVTEYYTRELTTRGYQSDAAQRAAVDRLQRCYDEWVAYKARRSNAFKKLINHPDLPRGVYMWGGVGRGKSFLMDSFYAV
VPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMTS
NYDPDDLYPDGLHRDRMLPAIALIKEKLDVINVDAGIDYRQRTLAQVQMYHTPLGAQADRELRHAFAKLAAVPDESPILH
IEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSA
AVPAEQLYVEGPMANEFARTVSRIVEMQSKEYLETPRRIVDTSLT
>Mature_365_residues
MNVTEYYTRELTTRGYQSDAAQRAAVDRLQRCYDEWVAYKARRSNAFKKLINHPDLPRGVYMWGGVGRGKSFLMDSFYAV
VPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIAKRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMTS
NYDPDDLYPDGLHRDRMLPAIALIKEKLDVINVDAGIDYRQRTLAQVQMYHTPLGAQADRELRHAFAKLAAVPDESPILH
IEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEARRFTWLIDVLYDHKVKLLMSA
AVPAEQLYVEGPMANEFARTVSRIVEMQSKEYLETPRRIVDTSLT

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=385, Percent_Identity=36.1038961038961, Blast_Score=234, Evalue=8e-62,
Organism=Escherichia coli, GI1789627, Length=363, Percent_Identity=44.3526170798898, Blast_Score=293, Evalue=2e-80,
Organism=Caenorhabditis elegans, GI17505769, Length=415, Percent_Identity=30.3614457831325, Blast_Score=203, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6320783, Length=317, Percent_Identity=35.6466876971609, Blast_Score=176, Evalue=4e-45,
Organism=Drosophila melanogaster, GI20129913, Length=349, Percent_Identity=33.810888252149, Blast_Score=186, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42336; Mature: 42336

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVTEYYTRELTTRGYQSDAAQRAAVDRLQRCYDEWVAYKARRSNAFKKLINHPDLPRGV
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
YMWGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIA
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMTSNYDPDDLYPDGLHRDRMLPA
HHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHH
IALIKEKLDVINVDAGIDYRQRTLAQVQMYHTPLGAQADRELRHAFAKLAAVPDESPILH
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
IEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEAR
ECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFTWLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVSRIVEMQSKEYLETPRRIV
HHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC
>Mature Secondary Structure
MNVTEYYTRELTTRGYQSDAAQRAAVDRLQRCYDEWVAYKARRSNAFKKLINHPDLPRGV
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
YMWGGVGRGKSFLMDSFYAVVPVQRKTRLHFHEFMREVHRELEELKGQADPLDELARRIA
EEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
KRYRLICFDEFHVSDIADAMILYRLLDRLFTNGVQFVMTSNYDPDDLYPDGLHRDRMLPA
HHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHH
IALIKEKLDVINVDAGIDYRQRTLAQVQMYHTPLGAQADRELRHAFAKLAAVPDESPILH
HHHHHHHHHEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE
IEKRELKALRKADGVVWFDFATLCGGPRSQNDYLELASRFHAIVLSEVPQMSPRMASEAR
ECHHHHHHHHHHCCEEEEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
RFTWLIDVLYDHKVKLLMSAAVPAEQLYVEGPMANEFARTVSRIVEMQSKEYLETPRRIV
HHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DTSLT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]